Detailed information
Bioinformatically predicted
Overview
| Name | letA | Type | Regulator |
| Locus tag | AL464_RS10415 | Genome accession | NZ_CP014046 |
| Coordinates | 2064690..2065334 (+) | Length | 214 a.a. |
| NCBI ID | WP_005386783.1 | Uniprot ID | Q87NC3 |
| Organism | Vibrio parahaemolyticus strain ATCC 17802 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2059690..2070334
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL464_RS10395 (AL464_09680) | - | 2059987..2060307 (-) | 321 | WP_005465080.1 | HI1450 family dsDNA-mimic protein | - |
| AL464_RS10400 (AL464_09685) | yeiP | 2060310..2060876 (-) | 567 | WP_005465079.1 | elongation factor P-like protein YeiP | - |
| AL464_RS10405 (AL464_09690) | - | 2061063..2061830 (+) | 768 | WP_017448417.1 | nucleotidyltransferase domain-containing protein | - |
| AL464_RS10410 (AL464_09695) | - | 2061827..2064190 (-) | 2364 | WP_029804414.1 | DNA polymerase II | - |
| AL464_RS10415 (AL464_09700) | letA | 2064690..2065334 (+) | 645 | WP_005386783.1 | UvrY/SirA/GacA family response regulator transcription factor | Regulator |
| AL464_RS10420 (AL464_09705) | uvrC | 2065336..2067168 (+) | 1833 | WP_077345793.1 | excinuclease ABC subunit UvrC | Machinery gene |
| AL464_RS10425 (AL464_09710) | pgsA | 2067215..2067772 (+) | 558 | WP_005494716.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23765.32 Da Isoelectric Point: 5.6509
>NTDB_id=144148 AL464_RS10415 WP_005386783.1 2064690..2065334(+) (letA) [Vibrio parahaemolyticus strain ATCC 17802]
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEADSGEDAVKWCRSNHADVVLMDMNMPGIGGLEATKKILRVNPDVKIIV
LTVHTENPFPTKVMQAGASGYLTKGAGPDEMVNAIRVVNSGQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMLMI
TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLDINGDVELTHLAIRHGMLDTETL
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEADSGEDAVKWCRSNHADVVLMDMNMPGIGGLEATKKILRVNPDVKIIV
LTVHTENPFPTKVMQAGASGYLTKGAGPDEMVNAIRVVNSGQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMLMI
TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLDINGDVELTHLAIRHGMLDTETL
Nucleotide
Download Length: 645 bp
>NTDB_id=144148 AL464_RS10415 WP_005386783.1 2064690..2065334(+) (letA) [Vibrio parahaemolyticus strain ATCC 17802]
TTGATTAATGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAACGTAGCAGGAGAAGCTGACAGCGGTGAAGATGCAGTGAAATGGTGTCGCAGTAATCATGCTGACGTCGTTTTAATGG
ACATGAACATGCCTGGGATTGGCGGCTTGGAAGCCACCAAGAAAATTCTTCGCGTGAATCCAGATGTGAAAATCATCGTA
CTAACCGTTCATACGGAAAATCCGTTTCCAACCAAAGTGATGCAGGCTGGTGCTTCTGGTTATTTAACCAAAGGTGCAGG
GCCGGATGAAATGGTAAATGCAATTCGTGTGGTCAATAGTGGGCAGCGTTACATCTCCCCAGAGATAGCGCAGCAAATGG
CATTGAGCCAGTTCTCACCAGCCTCTGAAAACCCATTTAAAGATTTGTCCGAACGTGAACTGCAAATCATGCTTATGATC
ACGAAAGGTCAGAAAGTAACGGATATTTCTGAGCAACTTAACTTAAGTCCAAAGACAGTCAACAGCTACCGCTATCGACT
GTTTAGCAAGCTGGACATTAATGGTGACGTCGAGTTAACACACTTAGCGATTCGCCACGGAATGCTGGACACCGAGACCC
TTTAG
TTGATTAATGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAACGTAGCAGGAGAAGCTGACAGCGGTGAAGATGCAGTGAAATGGTGTCGCAGTAATCATGCTGACGTCGTTTTAATGG
ACATGAACATGCCTGGGATTGGCGGCTTGGAAGCCACCAAGAAAATTCTTCGCGTGAATCCAGATGTGAAAATCATCGTA
CTAACCGTTCATACGGAAAATCCGTTTCCAACCAAAGTGATGCAGGCTGGTGCTTCTGGTTATTTAACCAAAGGTGCAGG
GCCGGATGAAATGGTAAATGCAATTCGTGTGGTCAATAGTGGGCAGCGTTACATCTCCCCAGAGATAGCGCAGCAAATGG
CATTGAGCCAGTTCTCACCAGCCTCTGAAAACCCATTTAAAGATTTGTCCGAACGTGAACTGCAAATCATGCTTATGATC
ACGAAAGGTCAGAAAGTAACGGATATTTCTGAGCAACTTAACTTAAGTCCAAAGACAGTCAACAGCTACCGCTATCGACT
GTTTAGCAAGCTGGACATTAATGGTGACGTCGAGTTAACACACTTAGCGATTCGCCACGGAATGCTGGACACCGAGACCC
TTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| letA | Legionella pneumophila str. Paris |
50.952 |
98.131 |
0.5 |
| letA | Legionella pneumophila strain ERS1305867 |
50.952 |
98.131 |
0.5 |