Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   WV34_RS14995 Genome accession   NZ_CP011252
Coordinates   2952065..2954356 (-) Length   763 a.a.
NCBI ID   WP_088613350.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain MT45     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2947065..2959356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WV34_RS14955 (WV34_14595) - 2947525..2947956 (+) 432 WP_013353387.1 Na(+)/H(+) antiporter subunit B -
  WV34_RS14960 (WV34_14600) - 2947956..2948297 (+) 342 WP_013353388.1 Na(+)/H(+) antiporter subunit C -
  WV34_RS14965 (WV34_14605) - 2948290..2949771 (+) 1482 WP_088613349.1 Na+/H+ antiporter subunit D -
  WV34_RS14970 (WV34_14610) - 2949777..2950253 (+) 477 WP_065982196.1 Na+/H+ antiporter subunit E -
  WV34_RS14975 (WV34_14615) - 2950253..2950537 (+) 285 WP_045509491.1 Na(+)/H(+) antiporter subunit F1 -
  WV34_RS14980 (WV34_14620) mnhG 2950521..2950895 (+) 375 WP_045509488.1 monovalent cation/H(+) antiporter subunit G -
  WV34_RS14985 (WV34_14625) - 2950935..2951318 (-) 384 WP_045509485.1 hotdog fold thioesterase -
  WV34_RS14990 (WV34_14630) comA 2951340..2951984 (-) 645 WP_014472195.1 response regulator transcription factor Regulator
  WV34_RS14995 (WV34_14635) comP 2952065..2954356 (-) 2292 WP_088613350.1 histidine kinase Regulator
  WV34_RS15000 (WV34_14640) comX 2954368..2954532 (-) 165 WP_007613432.1 competence pheromone ComX -
  WV34_RS15005 (WV34_14645) - 2954532..2955443 (-) 912 WP_088613883.1 polyprenyl synthetase family protein -
  WV34_RS15010 (WV34_14650) degQ 2955595..2955735 (-) 141 WP_013353398.1 degradation enzyme regulation protein DegQ Regulator
  WV34_RS15020 (WV34_14655) - 2956200..2956541 (+) 342 WP_045509476.1 hypothetical protein -
  WV34_RS15025 (WV34_14660) - 2956548..2957771 (-) 1224 WP_045509474.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 763 a.a.        Molecular weight: 88450.67 Da        Isoelectric Point: 7.4202

>NTDB_id=143910 WV34_RS14995 WP_088613350.1 2952065..2954356(-) (comP) [Bacillus amyloliquefaciens strain MT45]
MKSKYNKISVVLILLTLVYVIYLTYISTNNLLVGATISQNKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINHQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSQLSFGDFIPKFNLISF
FLLFLIVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTVEIGKITEFNQG
FAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQE
EGSGQAMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=143910 WV34_RS14995 WP_088613350.1 2952065..2954356(-) (comP) [Bacillus amyloliquefaciens strain MT45]
ATGAAGTCCAAGTACAATAAGATTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACAATTTCTCAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACCACCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCTATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGTTTCTTCATCATCA
AAATAAATGAAGAAAAAAACTTAAAATCTGCTTTGGTACTAATTGTATTTCTTTTGTCTGCTTCAATTGCATATATTAGT
GCTGGAGGGTCGGCAAAAGGTGATTTGCTCAGCAGATGTATCATGTTGTTAACATTAATAACTGTACCATTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTTGTATTGTATTTATTTCCAA
CTATAAATATATTATTTGAATTATTTCGGTCGCAATTATCTTTTGGTGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTTCTTCTTTTTTTAATTGTAGCATATTATTTTATTGTTATTTTGAGAAGAAACAAAGATACTGATCAGGCACATATTAT
AAAGGTGCTTGTAGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCATATGTATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTAATACCTTTTTCACTTGTATACCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTACGGCTTTTTAGCTTTAACCCCAACTATAATTCTGGT
TACGACAATAGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTAAAACTGACATTTTTAATATACATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTCTCAGAAAGATTCAATTATCAAGAC
AGTATTTATAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGAGAATTAAAAACGACCATTCT
CGAAGTAACTCTTACGAGTAAAGTGTATATATTTGAAGTCACGTATGATGGGAATGTAAAGGCATTTGACGAAAGAGATT
CAAGTTTGATAGATGATTATCAAGTTCTTTTAAATAGTGTTACTGTTGAGATAGGAAAAATAACGGAGTTTAATCAAGGT
TTCGCAATGAAAGTAGGAGAGCGGGGAGATAGATCTTTCGTTGTTCTCTGTTTGTCTAAGATGAATACGCCCCGCTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTGATGAAAATCGAAGAAC
TTATGAATCATCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATTGAGGAA
AAGCAGCGGTCGGATTTGGCCCGTGATCTGCATGATTCGGTGCTGCAGGATTTGATTTCTTTGAAACGCCAGTGTGAGCT
GTTTCTGGCCGATTTTAAGAAAGAAGAGCCTTGTCACATAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTCATTTTGATGACCCGGGAGACGTGCCACGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTGGTGAAGGCG
GTATCCAAGCTTGCAGCTCAGCAGCAGGAGCGTGCTCCGTTTCATATCCGTCTGAATACGGGACGGTTTACGGCGGCGCT
GGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAATGCCATGAAGCATTCACAGGCGAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGATGACGGGGTCGGATGCAATCAGGAA
GAAGGCAGCGGACAGGCGATGAGCATGGGGCTTTCGGGTATTAAGGAGCGCGTCCGGGCGCTTGACGGCCGGATGAAAAT
CGACACAAGTGAAGGAAATGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(563-632)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.896

100

0.544

Multiple sequence alignment