Detailed information NTG0141426

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: VN11_RS17570
• Genome accession: NZ_CP011010
• Coordinates: 3849349..3850407 (-)
• Length: 352 a.a.
• NCBI ID: WP_005410860.1
• Uniprot ID: A0A854DVP1
• Organism: Stenotrophomonas maltophilia strain ISMMS3 isolate Patient
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3844349..3855407

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VN11_RS17550 (VN11_17575)	-	3845254..3847218 (-)	1965	WP_053450673.1	type IV pilus secretin PilQ family protein	-
VN11_RS17555 (VN11_17580)	-	3847240..3847773 (-)	534	WP_006465989.1	pilus assembly protein PilP	-
VN11_RS17560 (VN11_17585)	pilO	3847773..3848447 (-)	675	WP_006465991.1	type 4a pilus biogenesis protein PilO	-
VN11_RS17565 (VN11_17590)	-	3848444..3849349 (-)	906	WP_053450674.1	PilN domain-containing protein	-
VN11_RS17570 (VN11_17595)	pilM	3849349..3850407 (-)	1059	WP_005410860.1	pilus assembly protein PilM	Machinery gene
VN11_RS17575 (VN11_17600)	-	3850627..3853050 (+)	2424	WP_053450675.1	penicillin-binding protein 1A	-
VN11_RS17580 (VN11_17605)	-	3853190..3853834 (+)	645	WP_006466035.1	hypothetical protein	-
VN11_RS17585 (VN11_17610)	-	3853939..3854685 (-)	747	WP_053450676.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37739.38 Da
• Isoelectric Point: 4.4047

>NTDB_id=141426 VN11_RS17570 WP_005410860.1 3849349..3850407(-) (pilM) [Stenotrophomonas maltophilia strain ISMMS3 isolate Patient]
MGLIPKSQSPLVGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAMNRSGSKAKLAAAA
VAGSAVITKVIPMPAELDENDMEAQIELEAVNYIPYPIEEVNLDFEVIGAIPNNPEMVQVLLAASRSENVELRQSALELG
GLQAKVMDVEAFAVENAYALVASELPVSIDGVVALVDIGATMTTLNVLRGGRSLYSREQVFGGKQLTDEIMRRYGLSYEE
AGLAKRQGGLPESYEMEVLEPFKEATVQQISRLLQFFYAGSEFNRVDHIVLAGGCAVLGGLPEMVEEQLGVPTVVANPLA
QMTLGPKVNAHALAQDAPALMIATGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=141426 VN11_RS17570 WP_005410860.1 3849349..3850407(-) (pilM) [Stenotrophomonas maltophilia strain ISMMS3 isolate Patient]
GTGGGGCTCATCCCAAAAAGTCAGTCGCCGCTTGTAGGCGTCGACATCAGTTCGACTGCGGTAAAGCTTTTGCAGCTGTC
CCGCAGCGGCAATCGTTTCCGTGTGGAACACTATGCTGTGGAACCACTTCCGCCGAATGCGGTGGTGGAGAAGAACATCG
TGGAGGTGGAAGCGGTCGGTGAGGCCATCCGCCGGGCGATGAACCGTTCAGGCAGCAAGGCCAAGCTGGCCGCTGCCGCC
GTCGCCGGGTCGGCGGTGATCACCAAGGTGATCCCGATGCCGGCCGAGCTCGACGAAAACGACATGGAAGCCCAGATCGA
GCTGGAAGCGGTCAACTACATTCCGTATCCGATCGAGGAAGTGAACCTGGACTTCGAGGTGATCGGGGCGATCCCGAACA
ACCCCGAGATGGTGCAGGTACTGCTGGCGGCGTCGCGTTCGGAGAATGTGGAGCTGCGCCAGTCGGCGCTGGAGCTCGGT
GGCCTGCAGGCCAAGGTGATGGACGTGGAGGCCTTTGCGGTCGAGAACGCCTACGCCCTGGTCGCCAGCGAGCTGCCGGT
GTCCATCGACGGTGTCGTCGCGCTGGTCGACATCGGCGCGACCATGACCACCCTCAATGTCCTGCGCGGCGGCCGCAGCC
TGTACAGCCGCGAACAGGTGTTCGGTGGCAAGCAGCTGACCGACGAGATCATGCGCCGCTACGGCCTGAGCTACGAGGAA
GCCGGCCTGGCCAAGCGCCAGGGTGGGTTGCCGGAAAGCTACGAGATGGAAGTGCTGGAGCCGTTCAAGGAAGCGACGGT
GCAGCAGATCAGCCGCCTGCTGCAGTTCTTCTATGCAGGCAGTGAGTTCAACCGCGTCGATCACATCGTGCTGGCCGGCG
GCTGTGCCGTGCTGGGTGGCCTGCCGGAGATGGTCGAAGAACAGCTGGGCGTGCCGACCGTGGTCGCCAACCCGCTGGCA
CAGATGACCCTGGGCCCGAAGGTGAACGCGCATGCGCTGGCCCAGGATGCCCCCGCGCTGATGATCGCCACCGGTCTGGC
GCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

3D structure

• AlphaFold DB: A0A854DVP1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.136	100	0.511
comM	Acinetobacter nosocomialis M2	51.136	100	0.511
comM	Acinetobacter baylyi ADP1	50	100	0.5
pilM	Legionella pneumophila strain ERS1305867	47.863	99.716	0.477