Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | ATC05_RS13045 | Genome accession | NZ_CP013245 |
| Coordinates | 2809607..2810230 (+) | Length | 207 a.a. |
| NCBI ID | WP_003103268.1 | Uniprot ID | G3XD51 |
| Organism | Pseudomonas aeruginosa strain VA-134 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2804607..2815230
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATC05_RS13030 (ATC05_13025) | - | 2805294..2807765 (-) | 2472 | WP_003095841.1 | penicillin-binding protein 1A | - |
| ATC05_RS13035 (ATC05_13030) | pilM | 2807950..2809014 (+) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| ATC05_RS13040 (ATC05_13035) | pilN | 2809014..2809610 (+) | 597 | WP_003095839.1 | type 4a pilus biogenesis protein PilN | Machinery gene |
| ATC05_RS13045 (ATC05_13040) | pilO | 2809607..2810230 (+) | 624 | WP_003103268.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ATC05_RS13050 (ATC05_13045) | comL/pilP | 2810227..2810751 (+) | 525 | WP_003095836.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| ATC05_RS13055 (ATC05_13050) | pilQ | 2810805..2812949 (+) | 2145 | WP_003146401.1 | type 4a pilus secretin PilQ | Machinery gene |
| ATC05_RS13060 (ATC05_13055) | aroK | 2812961..2813479 (+) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| ATC05_RS13065 (ATC05_13060) | aroB | 2813529..2814635 (+) | 1107 | WP_003107839.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 22819.26 Da Isoelectric Point: 4.7787
>NTDB_id=139802 ATC05_RS13045 WP_003103268.1 2809607..2810230(+) (pilO) [Pseudomonas aeruginosa strain VA-134]
MSLASSLESLRKIDINDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLSDMQAQLEQQAAEEETLKQQFSTKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPVAPGSTSKLRMSILAKTYRYNDKGLKK
MSLASSLESLRKIDINDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLSDMQAQLEQQAAEEETLKQQFSTKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPVAPGSTSKLRMSILAKTYRYNDKGLKK
Nucleotide
Download Length: 624 bp
>NTDB_id=139802 ATC05_RS13045 WP_003103268.1 2809607..2810230(+) (pilO) [Pseudomonas aeruginosa strain VA-134]
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGATATCAACGATCTCGACCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTGAGTGACA
TGCAGGCTCAGCTCGAACAGCAGGCCGCGGAAGAGGAGACGCTCAAGCAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAAGAGTCCTTTGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGCCTGGGCAGCGGCCTGGAGTTCGAGGAAATCAAGCTGCTTC
CCGAGGTTGCCCAGCAGTTCTACATCGAACTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTCACCCTGCATGACTTCGAGATCAAGCCGGTCGCGCCCGGCAGCACGTC
CAAGCTGCGCATGAGCATCCTGGCCAAGACCTATCGCTACAACGACAAGGGGCTGAAGAAATGA
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGATATCAACGATCTCGACCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTGAGTGACA
TGCAGGCTCAGCTCGAACAGCAGGCCGCGGAAGAGGAGACGCTCAAGCAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAAGAGTCCTTTGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGCCTGGGCAGCGGCCTGGAGTTCGAGGAAATCAAGCTGCTTC
CCGAGGTTGCCCAGCAGTTCTACATCGAACTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTCACCCTGCATGACTTCGAGATCAAGCCGGTCGCGCCCGGCAGCACGTC
CAAGCTGCGCATGAGCATCCTGGCCAAGACCTATCGCTACAACGACAAGGGGCTGAAGAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
46.114 |
93.237 |
0.43 |
| pilO | Acinetobacter baumannii D1279779 |
43.979 |
92.271 |
0.406 |
| comO/pilO | Acinetobacter baylyi ADP1 |
43.455 |
92.271 |
0.401 |