Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   ASU36_RS07035 Genome accession   NZ_CP013137
Coordinates   1411591..1412214 (-) Length   207 a.a.
NCBI ID   WP_058008134.1    Uniprot ID   -
Organism   Staphylococcus aureus strain XQ     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1406591..1417214
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ASU36_RS07015 (ASU36_07015) - 1407082..1408278 (-) 1197 WP_031927462.1 metallophosphoesterase family protein -
  ASU36_RS07020 (ASU36_07020) - 1409055..1409399 (-) 345 WP_000290301.1 YlbF/YmcA family competence regulator -
  ASU36_RS07025 (ASU36_07025) - 1409468..1410592 (-) 1125 WP_000992514.1 DUF445 domain-containing protein -
  ASU36_RS07030 (ASU36_07030) xdrA 1410771..1411235 (-) 465 WP_000375864.1 XRE family transcriptional regulator XdrA -
  ASU36_RS07035 (ASU36_07035) vraR 1411591..1412214 (-) 624 WP_058008134.1 response regulator Regulator
  ASU36_RS07040 (ASU36_07040) - 1412236..1413348 (-) 1113 WP_000437965.1 GAF domain-containing sensor histidine kinase -
  ASU36_RS07045 (ASU36_07045) - 1413511..1414332 (+) 822 WP_000669377.1 RluA family pseudouridine synthase -
  ASU36_RS07050 (ASU36_07050) fumC 1414782..1416167 (-) 1386 WP_000116225.1 class II fumarate hydratase -
  ASU36_RS07055 (ASU36_07055) - 1416363..1416758 (-) 396 WP_000901023.1 hypothetical protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23872.52 Da        Isoelectric Point: 5.3596

>NTDB_id=139065 ASU36_RS07035 WP_058008134.1 1411591..1412214(-) (vraR) [Staphylococcus aureus strain XQ]
MNKVILVDDHYIVRQGLRFLLSTIENIEVLQDFADGETFLEYLKEHEHPDIVLLDLVMPGMNGIEITEYIKAHYPDIKVL
VLTSYVDDEHVISAINKGADGYEMKDVEPQQLIETIRRVMNGEKMINPKAQDVFETVSQKPHYTNKLSKREIEVLREMVK
GKTNKEIAETLFVSEKTIKTHVSHIFSKLQVSDRTQAAIYAMENKLI

Nucleotide


Download         Length: 624 bp        

>NTDB_id=139065 ASU36_RS07035 WP_058008134.1 1411591..1412214(-) (vraR) [Staphylococcus aureus strain XQ]
ATGAACAAAGTAATATTAGTAGATGACCATTATATTGTGCGACAAGGATTGCGATTTTTATTATCCACGATTGAAAACAT
AGAAGTTTTACAAGACTTTGCAGATGGAGAAACATTTTTAGAATATTTAAAAGAGCATGAGCACCCTGATATTGTGCTAT
TAGATTTAGTGATGCCTGGCATGAATGGTATTGAAATTACGGAATATATTAAGGCACATTATCCGGATATTAAAGTTTTG
GTATTAACAAGTTATGTTGATGATGAACATGTAATTTCAGCAATCAATAAAGGTGCTGATGGTTATGAAATGAAAGACGT
TGAGCCTCAGCAATTAATTGAAACTATTAGACGAGTTATGAACGGTGAAAAAATGATAAATCCTAAGGCACAAGATGTAT
TCGAAACAGTTAGCCAAAAACCACACTACACGAATAAGTTGTCAAAGAGAGAAATTGAAGTGTTACGTGAAATGGTTAAA
GGTAAAACAAATAAAGAGATAGCAGAAACTTTATTTGTATCTGAAAAAACAATTAAAACACATGTCAGTCATATATTTAG
TAAATTACAAGTTAGCGATCGTACACAAGCAGCAATTTATGCAATGGAAAATAAGTTGATTTAG

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(146-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

40.58

100

0.406
  degU Bacillus subtilis subsp. subtilis str. 168

34.685

100

0.372
  letA Legionella pneumophila str. Paris

35.714

100

0.362
  letA Legionella pneumophila strain ERS1305867

35.714

100

0.362