Detailed information
Bioinformatically predicted
Overview
| Name | dinR/lexA | Type | Regulator |
| Locus tag | AO356_RS21830 | Genome accession | NZ_CP012831 |
| Coordinates | 4879854..4880471 (+) | Length | 205 a.a. |
| NCBI ID | WP_060741504.1 | Uniprot ID | - |
| Organism | Pseudomonas fluorescens strain FW300-N2C3 | ||
| Function | repressor of recA; repressor of dinR (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 4874854..4885471
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AO356_RS21805 (AO356_21780) | - | 4875231..4876637 (+) | 1407 | WP_060741499.1 | ABC transporter substrate-binding protein | - |
| AO356_RS21810 (AO356_21785) | - | 4876766..4877548 (+) | 783 | WP_060741500.1 | ABC transporter permease | - |
| AO356_RS21815 (AO356_21790) | - | 4877548..4878396 (+) | 849 | WP_060741501.1 | ABC transporter ATP-binding protein | - |
| AO356_RS21820 (AO356_21795) | - | 4878393..4879355 (+) | 963 | WP_060741502.1 | HEAT repeat domain-containing protein | - |
| AO356_RS21825 (AO356_21800) | - | 4879352..4879639 (+) | 288 | WP_060741503.1 | DUF971 domain-containing protein | - |
| AO356_RS21830 (AO356_21805) | dinR/lexA | 4879854..4880471 (+) | 618 | WP_060741504.1 | transcriptional repressor LexA | Regulator |
| AO356_RS21835 (AO356_21810) | imuA | 4880471..4881103 (+) | 633 | WP_060741505.1 | translesion DNA synthesis-associated protein ImuA | - |
| AO356_RS21840 (AO356_21815) | - | 4881111..4882532 (+) | 1422 | WP_060741506.1 | Y-family DNA polymerase | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 22436.87 Da Isoelectric Point: 6.2538
>NTDB_id=136771 AO356_RS21830 WP_060741504.1 4879854..4880471(+) (dinR/lexA) [Pseudomonas fluorescens strain FW300-N2C3]
MYSMTTLTPRRTAILTFIRERIADQGQPPSLAEISEAFGFASRSVARKHVLALTEAGFIEVNPHQARGIRLLNQPPRPEL
LDVPVLGRVAAGVPIGADAEVHSRLMLDPAIFTKAPDYLLRVQGDSMIEDGILDGDLVGVQRTPQASNGQIVVARLDGEV
TIKRFERIGERVRLLPRNPAYQPIIVEADQDLAIEGVFCGLVRQG
MYSMTTLTPRRTAILTFIRERIADQGQPPSLAEISEAFGFASRSVARKHVLALTEAGFIEVNPHQARGIRLLNQPPRPEL
LDVPVLGRVAAGVPIGADAEVHSRLMLDPAIFTKAPDYLLRVQGDSMIEDGILDGDLVGVQRTPQASNGQIVVARLDGEV
TIKRFERIGERVRLLPRNPAYQPIIVEADQDLAIEGVFCGLVRQG
Nucleotide
Download Length: 618 bp
>NTDB_id=136771 AO356_RS21830 WP_060741504.1 4879854..4880471(+) (dinR/lexA) [Pseudomonas fluorescens strain FW300-N2C3]
ATGTACTCCATGACGACTCTCACCCCCCGCCGCACCGCCATCCTGACGTTCATCCGCGAACGCATCGCCGATCAGGGTCA
GCCTCCCAGCCTCGCTGAAATCAGCGAGGCGTTCGGTTTCGCCTCCCGTAGTGTGGCGCGCAAGCATGTGCTGGCGTTGA
CCGAGGCCGGTTTCATCGAAGTCAATCCGCACCAGGCCCGGGGCATCCGGCTGTTGAACCAGCCGCCACGGCCTGAACTG
CTGGACGTGCCGGTGCTGGGGCGGGTGGCGGCTGGCGTGCCGATCGGTGCCGACGCCGAGGTTCACAGCCGCCTGATGCT
GGACCCGGCGATTTTCACCAAGGCGCCGGACTACCTGCTGCGGGTCCAGGGTGATTCGATGATCGAGGATGGCATTCTCG
ACGGTGACCTGGTGGGCGTGCAGCGCACACCCCAGGCCTCCAACGGCCAGATCGTCGTGGCGCGCCTGGACGGTGAGGTC
ACCATCAAGCGCTTCGAGCGCATCGGCGAACGGGTGCGGTTGCTGCCGCGCAACCCGGCCTACCAGCCGATCATCGTCGA
GGCCGACCAGGACCTGGCGATAGAAGGGGTGTTCTGTGGCTTGGTGAGGCAAGGTTGA
ATGTACTCCATGACGACTCTCACCCCCCGCCGCACCGCCATCCTGACGTTCATCCGCGAACGCATCGCCGATCAGGGTCA
GCCTCCCAGCCTCGCTGAAATCAGCGAGGCGTTCGGTTTCGCCTCCCGTAGTGTGGCGCGCAAGCATGTGCTGGCGTTGA
CCGAGGCCGGTTTCATCGAAGTCAATCCGCACCAGGCCCGGGGCATCCGGCTGTTGAACCAGCCGCCACGGCCTGAACTG
CTGGACGTGCCGGTGCTGGGGCGGGTGGCGGCTGGCGTGCCGATCGGTGCCGACGCCGAGGTTCACAGCCGCCTGATGCT
GGACCCGGCGATTTTCACCAAGGCGCCGGACTACCTGCTGCGGGTCCAGGGTGATTCGATGATCGAGGATGGCATTCTCG
ACGGTGACCTGGTGGGCGTGCAGCGCACACCCCAGGCCTCCAACGGCCAGATCGTCGTGGCGCGCCTGGACGGTGAGGTC
ACCATCAAGCGCTTCGAGCGCATCGGCGAACGGGTGCGGTTGCTGCCGCGCAACCCGGCCTACCAGCCGATCATCGTCGA
GGCCGACCAGGACCTGGCGATAGAAGGGGTGTTCTGTGGCTTGGTGAGGCAAGGTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dinR/lexA | Bacillus subtilis subsp. subtilis str. 168 |
39.024 |
100 |
0.39 |