Detailed information NTG0136766

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: RU84_RS01580
• Genome accession: NZ_CP010397
• Coordinates: 344152..344634 (+)
• Length: 160 a.a.
• NCBI ID: WP_029424121.1
• Uniprot ID: A0AAX0TXI4
• Organism: Acinetobacter baumannii strain 6200
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 339152..349634

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RU84_RS01570 (RU84_01570)	pilX	339455..340273 (+)	819	WP_000149377.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
RU84_RS01575 (RU84_01575)	pilY1	340285..344139 (+)	3855	WP_023896142.1	PilC/PilY family type IV pilus protein	Machinery gene
RU84_RS01580 (RU84_01580)	pilY2	344152..344634 (+)	483	WP_029424121.1	type IV pilin protein	Machinery gene
RU84_RS01585 (RU84_01585)	pilE	344631..345056 (+)	426	WP_005130737.1	type IV pilin protein	Machinery gene
RU84_RS01590 (RU84_01590)	rpsP	345203..345454 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
RU84_RS01595 (RU84_01595)	rimM	345474..346022 (+)	549	WP_005130741.1	ribosome maturation factor RimM	-
RU84_RS01600 (RU84_01600)	trmD	346068..346808 (+)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
RU84_RS01605 (RU84_01605)	rplS	347016..347384 (+)	369	WP_000014562.1	50S ribosomal protein L19	-
RU84_RS01610 (RU84_01610)	-	347437..348378 (-)	942	WP_086221420.1	lipase family alpha/beta hydrolase	-
RU84_RS01615 (RU84_01615)	-	348493..349524 (-)	1032	WP_029424123.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17630.92 Da
• Isoelectric Point: 8.8351

>NTDB_id=136766 RU84_RS01580 WP_029424121.1 344152..344634(+) (pilY2) [Acinetobacter baumannii strain 6200]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIVIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTRGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=136766 RU84_RS01580 WP_029424121.1 344152..344634(+) (pilY2) [Acinetobacter baumannii strain 6200]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGTTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCAGAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCTGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-133)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	92.5	100	0.925
comE	Acinetobacter baylyi ADP1	38.953	100	0.419