Detailed information NTG0136468

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: SanJ4211_RS00380
• Genome accession: NZ_CP012805
• Coordinates: 64491..65489 (+)
• Length: 332 a.a.
• NCBI ID: WP_021001168.1
• Uniprot ID: -
• Organism: Streptococcus anginosus strain J4211
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 59491..70489

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SanJ4211_RS00355 (SanJ4211_0052)	-	59654..60481 (+)	828	WP_003027209.1	PTS system mannose/fructose/sorbose family transporter subunit IID	-
SanJ4211_RS00360 (SanJ4211_0053)	-	60499..60903 (+)	405	WP_021001165.1	PTS sugar transporter subunit IIA	-
SanJ4211_RS00365 (SanJ4211_0054)	-	61070..62239 (+)	1170	WP_057489501.1	SIS domain-containing protein	-
SanJ4211_RS00370 (SanJ4211_0055)	lacD	62250..63251 (+)	1002	WP_021001167.1	tagatose-bisphosphate aldolase	-
SanJ4211_RS00375 (SanJ4211_0056)	-	63294..64331 (+)	1038	WP_003027213.1	aldose epimerase family protein	-
SanJ4211_RS00380 (SanJ4211_0057)	ruvB	64491..65489 (+)	999	WP_021001168.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
SanJ4211_RS00385 (SanJ4211_0058)	-	65491..66054 (+)	564	WP_021001169.1	nucleotidyltransferase family protein	-
SanJ4211_RS00390 (SanJ4211_0059)	-	66293..66721 (+)	429	WP_003027217.1	low molecular weight protein-tyrosine-phosphatase	-
SanJ4211_RS00395 (SanJ4211_0060)	-	66729..67142 (+)	414	WP_003027219.1	MORN repeat-containing protein	-
SanJ4211_RS00400 (SanJ4211_0061)	-	67132..68949 (+)	1818	WP_057489502.1	acyltransferase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37323.64 Da
• Isoelectric Point: 4.3374

>NTDB_id=136468 SanJ4211_RS00380 WP_021001168.1 64491..65489(+) (ruvB) [Streptococcus anginosus strain J4211]
MSRILDNELMGDEELVERTLRPQYLQEYIGQDKVKNQLKIFIEAAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGSGETSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAEADLTEIVERTAEIFEMDITHEAAEELALRSRGTPRIANRLLKRVRDFAQIMGDGLID
DQITDQALTMLDVDQEGLDYVDQKILKTMIEVYGGGPVGLGTLSVNIAEEQETVEDMYEPYLIQKGFVMRTRTGRVATRK
AYEHLGYEYLEK

Nucleotide

• Length: 999 bp

>NTDB_id=136468 SanJ4211_RS00380 WP_021001168.1 64491..65489(+) (ruvB) [Streptococcus anginosus strain J4211]
ATGAGTAGAATTTTGGATAATGAATTGATGGGAGACGAGGAGCTCGTAGAGCGCACATTGCGTCCCCAGTATTTACAAGA
ATACATCGGTCAAGACAAGGTCAAAAATCAACTGAAAATTTTCATTGAGGCAGCTAAACTGCGAGATGAAGCACTAGATC
ACACGTTGCTTTTTGGACCTCCAGGGTTGGGAAAGACCACTATGGCTTTTGTCATCGCCAATGAGCTAGGAGTTAATCTC
AAGCAAACTTCTGGTCCGGTCATCGAAAAAGCAGGCGATTTGGTGGCAATCTTGAACGATTTGGAGCCGGGAGATGTTCT
CTTTATTGATGAGATTCACCGCTTGCCTATGTCTGTTGAAGAGGTGCTCTATAGCGCTATGGAGGACTTTTACATTGATA
TTATGATTGGCTCTGGCGAGACCAGTCGTAGTGTTCACTTGGACTTGCCACCGTTTACCTTGATTGGAGCAACGACCCGA
GCTGGTATGTTGTCCAATCCTTTACGGGCTCGTTTTGGCATTACTGGTCACATGGAATATTATGCAGAAGCAGATTTGAC
CGAGATTGTGGAGCGAACGGCAGAAATCTTTGAAATGGACATCACTCATGAAGCAGCTGAAGAATTAGCACTGCGTAGCC
GAGGCACGCCTCGGATTGCCAATCGACTTCTTAAACGCGTACGAGATTTTGCTCAGATTATGGGTGACGGGCTGATTGAT
GACCAAATTACTGATCAAGCGCTGACGATGCTGGATGTGGATCAAGAAGGCTTAGATTATGTGGATCAGAAGATTCTCAA
GACCATGATTGAGGTTTATGGCGGCGGGCCAGTTGGTCTGGGGACTCTGTCTGTCAATATCGCAGAAGAGCAGGAAACGG
TAGAAGACATGTATGAGCCTTATTTGATCCAGAAAGGATTTGTTATGCGAACTCGAACAGGGCGCGTGGCAACTCGTAAA
GCTTACGAGCATTTGGGTTATGAATATTTGGAGAAATAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	92.169	100	0.922
ruvB	Streptococcus pneumoniae R6	91.867	100	0.919
ruvB	Streptococcus pneumoniae D39	91.867	100	0.919
ruvB	Bacillus subtilis subsp. subtilis str. 168	59.509	98.193	0.584
ruvB	Helicobacter pylori 26695	51.703	97.289	0.503
ruvB	Synechocystis sp. PCC 6803	50.323	93.373	0.47