Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACH32_RS10615 Genome accession   NZ_CP012756
Coordinates   2095807..2096481 (+) Length   224 a.a.
NCBI ID   WP_001166503.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JS395     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2090807..2101481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH32_RS10585 (ACH32_10580) - 2091020..2092087 (+) 1068 WP_000980142.1 membrane protein -
  ACH32_RS10590 (ACH32_10585) - 2092238..2093281 (+) 1044 WP_001030756.1 alpha/beta hydrolase -
  ACH32_RS10600 (ACH32_10595) - 2093610..2094038 (+) 429 WP_000198504.1 hypothetical protein -
  ACH32_RS10605 (ACH32_10600) - 2094249..2094755 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  ACH32_RS10610 (ACH32_10605) graX 2094868..2095791 (+) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  ACH32_RS10615 (ACH32_10610) braR 2095807..2096481 (+) 675 WP_001166503.1 response regulator transcription factor GraR/ApsR Regulator
  ACH32_RS10620 (ACH32_10615) graS 2096474..2097514 (+) 1041 WP_001061270.1 histidine kinase GraS/ApsS -
  ACH32_RS10625 (ACH32_10620) vraF 2097661..2098422 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  ACH32_RS10630 (ACH32_10625) - 2098412..2100301 (+) 1890 WP_000009407.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26048.89 Da        Isoelectric Point: 4.3968

>NTDB_id=136352 ACH32_RS10615 WP_001166503.1 2095807..2096481(+) (braR) [Staphylococcus aureus strain JS395]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=136352 ACH32_RS10615 WP_001166503.1 2095807..2096481(+) (braR) [Staphylococcus aureus strain JS395]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGCCGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.364

98.214

0.406

Multiple sequence alignment