Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG   Type   Machinery gene
Locus tag   RP72_RS13350 Genome accession   NZ_CP010314
Coordinates   2535629..2536003 (-) Length   124 a.a.
NCBI ID   WP_003230170.1    Uniprot ID   A0AAE2SIW8
Organism   Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2530629..2541003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RP72_RS13310 (RP72_13310) yqhG 2530961..2531755 (+) 795 WP_003230200.1 YqhG family protein -
  RP72_RS13315 (RP72_13315) sinI 2531938..2532111 (+) 174 WP_003230187.1 anti-repressor SinI Regulator
  RP72_RS13320 (RP72_13320) sinR 2532145..2532480 (+) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  RP72_RS13325 (RP72_13325) tasA 2532573..2533358 (-) 786 WP_004398632.1 biofilm matrix protein TasA -
  RP72_RS13330 (RP72_13330) sipW 2533422..2533994 (-) 573 WP_003246088.1 signal peptidase I SipW -
  RP72_RS13335 (RP72_13335) tapA 2533978..2534739 (-) 762 WP_004399106.1 amyloid fiber anchoring/assembly protein TapA -
  RP72_RS13340 (RP72_13340) yqzG 2535011..2535337 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  RP72_RS13345 (RP72_13345) spoIITA 2535379..2535558 (-) 180 WP_003230176.1 YqzE family protein -
  RP72_RS13350 (RP72_13350) comGG 2535629..2536003 (-) 375 WP_003230170.1 ComG operon protein ComGG Machinery gene
  RP72_RS13355 (RP72_13355) comGF 2536004..2536387 (-) 384 WP_003230168.1 ComG operon protein ComGF Machinery gene
  RP72_RS13360 (RP72_13360) comGE 2536413..2536760 (-) 348 WP_003230165.1 ComG operon protein 5 Machinery gene
  RP72_RS13365 (RP72_13365) comGD 2536744..2537175 (-) 432 WP_004398628.1 comG operon protein ComGD Machinery gene
  RP72_RS13370 (RP72_13370) comGC 2537165..2537461 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  RP72_RS13375 (RP72_13375) comGB 2537475..2538512 (-) 1038 WP_009967727.1 comG operon protein ComGB Machinery gene
  RP72_RS13380 (RP72_13380) comGA 2538499..2539569 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  RP72_RS13390 (RP72_13390) corA 2539981..2540934 (-) 954 WP_004399136.1 magnesium transporter CorA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14539.79 Da        Isoelectric Point: 9.2806

>NTDB_id=136278 RP72_RS13350 WP_003230170.1 2535629..2536003(-) (comGG) [Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)]
MYRTRGFIYPAVLFVSALVLLIVNFVAAQYISRCMFEKETKELYIGENLLQNGVLLSIRHVLEERKGQEGTQQFLYGRVS
YYIHDTSIKEQKEINLRVSTDSGTERTAQIVFDQKQKKLLRWTE

Nucleotide


Download         Length: 375 bp        

>NTDB_id=136278 RP72_RS13350 WP_003230170.1 2535629..2536003(-) (comGG) [Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)]
ATGTATCGTACAAGAGGGTTTATTTATCCAGCTGTTCTTTTTGTGTCAGCGCTTGTGCTGTTAATCGTGAACTTTGTTGC
TGCTCAATATATTTCACGCTGCATGTTTGAGAAGGAAACAAAAGAGTTATACATAGGAGAGAATTTGCTTCAAAATGGGG
TGCTTCTTTCGATTCGGCATGTTCTAGAGGAACGGAAAGGCCAGGAGGGTACGCAGCAATTTCTATATGGACGGGTTTCT
TATTACATTCATGATACATCGATAAAAGAACAAAAAGAAATCAACTTAAGAGTGTCAACGGATTCGGGAACAGAAAGAAC
TGCACAGATCGTGTTTGACCAAAAACAGAAAAAACTGCTGAGATGGACAGAATAA

Domains

Predicted by InterproScan.

ComG operon protein 7 (ComGG)

(30-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment