Detailed information NTG0133529

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: QF06_RS00845
• Genome accession: NZ_CP010014
• Coordinates: 199543..200691 (+)
• Length: 382 a.a.
• NCBI ID: WP_043940053.1
• Uniprot ID: -
• Organism: Bacillus sp. YP1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 194543..205691

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QF06_RS00825 (QF06_00825)	-	194919..195599 (-)	681	WP_041850693.1	ABC transporter ATP-binding protein	-
QF06_RS00830 (QF06_00830)	-	195615..197075 (-)	1461	WP_041850694.1	ABC transporter permease	-
QF06_RS00835 (QF06_00835)	yclJ	197288..197971 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
QF06_RS00840 (QF06_00840)	yclK	197958..199379 (+)	1422	WP_072173981.1	two-component system sensor histidine kinase YclK	-
QF06_RS00845 (QF06_00845)	rapC	199543..200691 (+)	1149	WP_043940053.1	response regulator aspartate phosphatase RapC	Regulator
QF06_RS00850 (QF06_00850)	phrC	200675..200797 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
QF06_RS20775 (QF06_00855)	-	200899..200988 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
QF06_RS20780 (QF06_00860)	-	201070..201183 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
QF06_RS00865 (QF06_00865)	-	201337..202701 (-)	1365	WP_043940054.1	aspartate kinase	-
QF06_RS00870 (QF06_00870)	ceuB	203086..204036 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
QF06_RS00875 (QF06_00875)	yclO	204029..204976 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45709.75 Da
• Isoelectric Point: 4.9618

>NTDB_id=133529 QF06_RS00845 WP_043940053.1 199543..200691(+) (rapC) [Bacillus sp. YP1]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVFTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=133529 QF06_RS00845 WP_043940053.1 199543..200691(+) (rapC) [Bacillus sp. YP1]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTTCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568