Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | BF36_RS25660 | Genome accession | NZ_CP009720 |
| Coordinates | 4779225..4779746 (+) | Length | 173 a.a. |
| NCBI ID | WP_000981967.1 | Uniprot ID | A0A063CSK8 |
| Organism | Bacillus thuringiensis strain HD682 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4774225..4784746
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BF36_RS25630 (BF36_4961) | spo0J | 4774673..4775524 (+) | 852 | WP_001051842.1 | stage 0 sporulation protein Spo0J | - |
| BF36_RS25635 (BF36_4962) | yyaC | 4775545..4776141 (-) | 597 | WP_001020723.1 | spore protease YyaC | - |
| BF36_RS25640 (BF36_4963) | - | 4776401..4777282 (+) | 882 | WP_000382909.1 | mechanosensitive ion channel family protein | - |
| BF36_RS25645 (BF36_4964) | - | 4777303..4777500 (+) | 198 | WP_000436051.1 | DUF951 domain-containing protein | - |
| BF36_RS25650 (BF36_4965) | ychF | 4777616..4778716 (+) | 1101 | WP_000524669.1 | redox-regulated ATPase YchF | - |
| BF36_RS25655 (BF36_4966) | rpsF | 4778908..4779198 (+) | 291 | WP_001233779.1 | 30S ribosomal protein S6 | - |
| BF36_RS25660 (BF36_4967) | ssbA | 4779225..4779746 (+) | 522 | WP_000981967.1 | single-stranded DNA-binding protein | Machinery gene |
| BF36_RS25665 (BF36_4968) | rpsR | 4779792..4780025 (+) | 234 | WP_000918874.1 | 30S ribosomal protein S18 | - |
| BF36_RS25670 (BF36_4969) | - | 4780106..4781041 (+) | 936 | WP_000799149.1 | YybS family protein | - |
| BF36_RS25675 (BF36_4970) | - | 4781120..4783093 (+) | 1974 | WP_001113900.1 | DHH family phosphoesterase | - |
| BF36_RS25680 (BF36_4971) | rplI | 4783090..4783536 (+) | 447 | WP_000864235.1 | 50S ribosomal protein L9 | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 18823.61 Da Isoelectric Point: 4.9327
>NTDB_id=131597 BF36_RS25660 WP_000981967.1 4779225..4779746(+) (ssbA) [Bacillus thuringiensis strain HD682]
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQSSNPFGQSSNSGNQGNQGNSGFTKNDDPFSNV
GQPIDISDDDLPF
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQSSNPFGQSSNSGNQGNQGNSGFTKNDDPFSNV
GQPIDISDDDLPF
Nucleotide
Download Length: 522 bp
>NTDB_id=131597 BF36_RS25660 WP_000981967.1 4779225..4779746(+) (ssbA) [Bacillus thuringiensis strain HD682]
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCGAATCAACAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAGCGTGTATATGTAACAGAAGTTCTTGCGGAAAGCGTACAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAAGCTCTAACCCATTTG
GTCAATCTAGTAATTCGGGCAACCAAGGTAACCAAGGAAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTA
GGTCAACCGATCGACATTTCCGACGACGATTTACCGTTCTAA
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCGAATCAACAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAGCGTGTATATGTAACAGAAGTTCTTGCGGAAAGCGTACAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAAGCTCTAACCCATTTG
GTCAATCTAGTAATTCGGGCAACCAAGGTAACCAAGGAAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTA
GGTCAACCGATCGACATTTCCGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
72.316 |
100 |
0.74 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.286 |
100 |
0.59 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
65.094 |
61.272 |
0.399 |
| ssb | Glaesserella parasuis strain SC1401 |
36.264 |
100 |
0.382 |