Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BG05_RS10670 | Genome accession | NZ_CP009692 |
| Coordinates | 1697250..1698293 (+) | Length | 347 a.a. |
| NCBI ID | WP_012261710.1 | Uniprot ID | - |
| Organism | Bacillus mycoides strain ATCC 6462 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1692250..1703293
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG05_RS10635 (BG05_1768) | - | 1692458..1692946 (+) | 489 | WP_002015119.1 | hypothetical protein | - |
| BG05_RS10640 (BG05_1769) | - | 1692983..1693294 (-) | 312 | WP_002129099.1 | hypothetical protein | - |
| BG05_RS10645 (BG05_1770) | - | 1693547..1693762 (+) | 216 | WP_002067106.1 | DUF3912 family protein | - |
| BG05_RS10650 (BG05_1771) | - | 1693850..1694242 (+) | 393 | WP_002190672.1 | hypothetical protein | - |
| BG05_RS10655 (BG05_1772) | - | 1694323..1695717 (-) | 1395 | WP_002138338.1 | L-cystine transporter | - |
| BG05_RS10660 (BG05_1773) | - | 1695825..1696067 (-) | 243 | WP_002015110.1 | DUF2626 domain-containing protein | - |
| BG05_RS10665 (BG05_1774) | - | 1696349..1697044 (-) | 696 | WP_002014995.1 | helix-turn-helix transcriptional regulator | - |
| BG05_RS10670 (BG05_1775) | comGA | 1697250..1698293 (+) | 1044 | WP_012261710.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BG05_RS10675 (BG05_1776) | comGB | 1698280..1699317 (+) | 1038 | WP_002138336.1 | competence type IV pilus assembly protein ComGB | - |
| BG05_RS10680 (BG05_1777) | comGC | 1699329..1699628 (+) | 300 | WP_002088623.1 | competence type IV pilus major pilin ComGC | - |
| BG05_RS10685 (BG05_1778) | comGD | 1699625..1700080 (+) | 456 | WP_002129089.1 | competence type IV pilus minor pilin ComGD | - |
| BG05_RS10690 (BG05_1779) | - | 1700073..1700369 (+) | 297 | WP_033734238.1 | hypothetical protein | - |
| BG05_RS10695 (BG05_1780) | comGF | 1700353..1700814 (+) | 462 | WP_033734241.1 | competence type IV pilus minor pilin ComGF | - |
| BG05_RS10700 (BG05_1781) | comGG | 1700811..1701182 (+) | 372 | WP_033731267.1 | competence type IV pilus minor pilin ComGG | - |
| BG05_RS10705 (BG05_1782) | - | 1701357..1702007 (+) | 651 | WP_002131210.1 | 2OG-Fe(II) oxygenase | - |
| BG05_RS10710 (BG05_1783) | - | 1702159..1702656 (+) | 498 | WP_033731265.1 | shikimate kinase | - |
| BG05_RS10715 (BG05_1784) | - | 1702695..1702895 (+) | 201 | WP_002015009.1 | YqzE family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39276.79 Da Isoelectric Point: 9.4642
>NTDB_id=131279 BG05_RS10670 WP_012261710.1 1697250..1698293(+) (comGA) [Bacillus mycoides strain ATCC 6462]
MNSVELFANMIMKEACRVRASDLHIVPRQKDVAIQLRIGKDLITKRCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSSAEKLLSFLKHSHGLLVFTGPTGSGKTTTMYALLEV
ARKWQTRRIITLEDPVEQRKDGLLQIQINEKAGITYKTGLKAILRHDPDIILVGEIRDEETAKVAVRASLTGHLVMTTLH
TNDAKGAILRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCATLCKSMRKVRQASIYELLYGYELKQAIKEASGEH
VTYHYKTLEASVRKGYALGFLEEDVYV
MNSVELFANMIMKEACRVRASDLHIVPRQKDVAIQLRIGKDLITKRCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSSAEKLLSFLKHSHGLLVFTGPTGSGKTTTMYALLEV
ARKWQTRRIITLEDPVEQRKDGLLQIQINEKAGITYKTGLKAILRHDPDIILVGEIRDEETAKVAVRASLTGHLVMTTLH
TNDAKGAILRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCATLCKSMRKVRQASIYELLYGYELKQAIKEASGEH
VTYHYKTLEASVRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=131279 BG05_RS10670 WP_012261710.1 1697250..1698293(+) (comGA) [Bacillus mycoides strain ATCC 6462]
ATGAATAGTGTCGAGCTTTTTGCAAATATGATTATGAAAGAAGCTTGTAGGGTGCGAGCATCGGACTTACATATTGTGCC
CAGGCAGAAGGATGTGGCGATTCAATTACGTATTGGAAAAGATTTAATTACGAAACGGTGTATTGAGAAAGAATTTGGAG
AAAAGCTTGTTTCACACTTTAAATTTTTAGCATCAATGGATATAGGAGAGAGGAGAAAACCTCAAAATGGTTCGTTGTAC
TTACAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
CCATTTACAAGCATCTGTACAGCCACTGTCTCATCTTTCGTTATTTCCAAGTTCAGCGGAAAAATTACTCTCTTTTTTAA
AGCATTCTCATGGGTTACTCGTATTTACTGGGCCAACTGGTTCTGGAAAAACAACAACAATGTATGCGTTATTAGAAGTA
GCTAGAAAATGGCAAACACGTCGCATTATTACACTGGAAGATCCAGTTGAGCAAAGAAAAGACGGTTTATTACAAATTCA
AATAAATGAAAAAGCTGGTATCACATATAAAACGGGATTAAAGGCTATTTTGCGTCATGATCCAGATATTATTTTAGTTG
GCGAAATTCGTGATGAAGAAACAGCAAAAGTAGCTGTAAGGGCCAGTTTGACGGGACATTTAGTAATGACAACCTTGCAT
ACAAATGATGCGAAAGGAGCGATACTGCGATTTATGGATTATGGTATTACAAGGCAAGAAATTGAACAATCATTATTAGC
AGTAGCTGCTCAGCGGCTCGTCGAATTAAAATGTCCATTTTGCAGAGGGAAGTGTGCAACTTTGTGTAAATCAATGAGGA
AAGTGAGACAGGCAAGCATTTATGAACTGTTATATGGATATGAATTAAAACAAGCGATTAAAGAAGCAAGTGGAGAACAT
GTTACGTATCACTATAAAACGTTGGAAGCGTCGGTTCGAAAAGGGTATGCTTTAGGCTTTTTAGAAGAAGATGTATATGT
TTAA
ATGAATAGTGTCGAGCTTTTTGCAAATATGATTATGAAAGAAGCTTGTAGGGTGCGAGCATCGGACTTACATATTGTGCC
CAGGCAGAAGGATGTGGCGATTCAATTACGTATTGGAAAAGATTTAATTACGAAACGGTGTATTGAGAAAGAATTTGGAG
AAAAGCTTGTTTCACACTTTAAATTTTTAGCATCAATGGATATAGGAGAGAGGAGAAAACCTCAAAATGGTTCGTTGTAC
TTACAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
CCATTTACAAGCATCTGTACAGCCACTGTCTCATCTTTCGTTATTTCCAAGTTCAGCGGAAAAATTACTCTCTTTTTTAA
AGCATTCTCATGGGTTACTCGTATTTACTGGGCCAACTGGTTCTGGAAAAACAACAACAATGTATGCGTTATTAGAAGTA
GCTAGAAAATGGCAAACACGTCGCATTATTACACTGGAAGATCCAGTTGAGCAAAGAAAAGACGGTTTATTACAAATTCA
AATAAATGAAAAAGCTGGTATCACATATAAAACGGGATTAAAGGCTATTTTGCGTCATGATCCAGATATTATTTTAGTTG
GCGAAATTCGTGATGAAGAAACAGCAAAAGTAGCTGTAAGGGCCAGTTTGACGGGACATTTAGTAATGACAACCTTGCAT
ACAAATGATGCGAAAGGAGCGATACTGCGATTTATGGATTATGGTATTACAAGGCAAGAAATTGAACAATCATTATTAGC
AGTAGCTGCTCAGCGGCTCGTCGAATTAAAATGTCCATTTTGCAGAGGGAAGTGTGCAACTTTGTGTAAATCAATGAGGA
AAGTGAGACAGGCAAGCATTTATGAACTGTTATATGGATATGAATTAAAACAAGCGATTAAAGAAGCAAGTGGAGAACAT
GTTACGTATCACTATAAAACGTTGGAAGCGTCGGTTCGAAAAGGGTATGCTTTAGGCTTTTTAGAAGAAGATGTATATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.349 |
100 |
0.573 |
| pilB | Glaesserella parasuis strain SC1401 |
42.955 |
83.862 |
0.36 |