Detailed information NTG0128995

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: ABA10_RS13555
• Genome accession: NZ_CP011534
• Coordinates: 2633509..2634114 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain UD1022
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2628509..2639114

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABA10_RS13525 (ABA10_13525)	-	2629322..2629711 (+)	390	WP_031315243.1	TIGR04086 family membrane protein	-
ABA10_RS13530 (ABA10_13530)	yajC	2629768..2630034 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
ABA10_RS13535 (ABA10_13535)	tgt	2630071..2631216 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
ABA10_RS13540 (ABA10_13540)	queA	2631243..2632271 (-)	1029	WP_015483511.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
ABA10_RS13545 (ABA10_13545)	yrzS	2632301..2632501 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
ABA10_RS13550 (ABA10_13550)	ruvB	2632494..2633498 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ABA10_RS13555 (ABA10_13555)	ruvA	2633509..2634114 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
ABA10_RS13560 (ABA10_13560)	bofC	2634253..2634765 (-)	513	WP_047182964.1	sporulation cell-cell signaling protein BofC	-
ABA10_RS13565 (ABA10_13565)	csbX	2634813..2636120 (-)	1308	WP_003246197.1	MFS transporter	-
ABA10_RS13570 (ABA10_13570)	iolG	2636191..2637216 (-)	1026	WP_047182965.1	inositol 2-dehydrogenase	-
ABA10_RS13575 (ABA10_13575)	yrzF	2637454..2638101 (+)	648	WP_047182966.1	phosphotransferase	-
ABA10_RS21745 (ABA10_13580)	-	2638147..2638269 (-)	123	WP_003229707.1	hypothetical protein	-
ABA10_RS22055	-	2638354..2638428 (+)	75	Protein_2633	hypothetical protein	-
ABA10_RS21755 (ABA10_13585)	-	2638470..2638799 (+)	330	WP_250540414.1	DUF5412 family protein	-
ABA10_RS21280 (ABA10_13590)	-	2638806..2638946 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=128995 ABA10_RS13555 WP_003229717.1 2633509..2634114(-) (ruvA) [Bacillus subtilis strain UD1022]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=128995 ABA10_RS13555 WP_003229717.1 2633509..2634114(-) (ruvA) [Bacillus subtilis strain UD1022]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAGGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408