Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | SpyM6D471_RS07880 | Genome accession | NZ_CP011415 |
| Coordinates | 1569755..1570234 (-) | Length | 159 a.a. |
| NCBI ID | WP_011285164.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain D471 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1564755..1575234
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SpyM6D471_RS07860 (SpyM6D471_07855) | - | 1564924..1565529 (-) | 606 | WP_002982799.1 | response regulator transcription factor | - |
| SpyM6D471_RS07865 (SpyM6D471_07860) | - | 1565510..1567072 (-) | 1563 | WP_011184956.1 | ATP-binding protein | - |
| SpyM6D471_RS07870 (SpyM6D471_07865) | - | 1567112..1569019 (-) | 1908 | WP_011184957.1 | FtsX-like permease family protein | - |
| SpyM6D471_RS07875 (SpyM6D471_07870) | - | 1569021..1569758 (-) | 738 | WP_011184958.1 | ABC transporter ATP-binding protein | - |
| SpyM6D471_RS07880 (SpyM6D471_07875) | comA/nlmT | 1569755..1570234 (-) | 480 | WP_011285164.1 | ABC transporter ATP-binding protein | Regulator |
| SpyM6D471_RS07885 (SpyM6D471_07880) | - | 1570290..1571915 (-) | 1626 | WP_011184960.1 | DUF4135 domain-containing protein | - |
| SpyM6D471_RS07890 (SpyM6D471_07885) | - | 1571999..1572154 (-) | 156 | WP_027968842.1 | type A2 lanthipeptide | - |
| SpyM6D471_RS07895 (SpyM6D471_07890) | lacG | 1572661..1574067 (-) | 1407 | WP_011184962.1 | 6-phospho-beta-galactosidase | - |
Sequence
Protein
Download Length: 159 a.a. Molecular weight: 18490.13 Da Isoelectric Point: 6.6371
>NTDB_id=128056 SpyM6D471_RS07880 WP_011285164.1 1569755..1570234(-) (comA/nlmT) [Streptococcus pyogenes strain D471]
MFDGDVMYNISLGRESVSGEQVIETCKRVSIYDDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRILVTHRLNTVEKADKILIMDNGKIIDYGNHHYLYKNNKDYCDLYDSYMNKYQEEEVK
MFDGDVMYNISLGRESVSGEQVIETCKRVSIYDDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRILVTHRLNTVEKADKILIMDNGKIIDYGNHHYLYKNNKDYCDLYDSYMNKYQEEEVK
Nucleotide
Download Length: 480 bp
>NTDB_id=128056 SpyM6D471_RS07880 WP_011285164.1 1569755..1570234(-) (comA/nlmT) [Streptococcus pyogenes strain D471]
ATATTTGATGGGGATGTGATGTATAACATTTCGCTAGGGAGAGAATCTGTTTCAGGAGAACAGGTTATTGAAACTTGTAA
AAGGGTATCAATATATGATGATATCAGGAGTATGCCAATGAAGTTTCATACTCCACTTTTTCGAGATAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTCTAGCAAGAGAACTTGTAACCACCCCTAGAATCTTAGTTCTTGACGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGATTTTGGTTACCCA
TAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGCAAAATTATTGACTATGGAAACCATCATT
ATTTGTACAAAAATAATAAGGATTATTGTGACTTATATGACTCGTATATGAATAAATATCAGGAGGAAGAGGTAAAATGA
ATATTTGATGGGGATGTGATGTATAACATTTCGCTAGGGAGAGAATCTGTTTCAGGAGAACAGGTTATTGAAACTTGTAA
AAGGGTATCAATATATGATGATATCAGGAGTATGCCAATGAAGTTTCATACTCCACTTTTTCGAGATAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTCTAGCAAGAGAACTTGTAACCACCCCTAGAATCTTAGTTCTTGACGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGATTTTGGTTACCCA
TAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGCAAAATTATTGACTATGGAAACCATCATT
ATTTGTACAAAAATAATAAGGATTATTGTGACTTATATGACTCGTATATGAATAAATATCAGGAGGAAGAGGTAAAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
40.94 |
93.711 |
0.384 |
| rcrQ | Streptococcus mutans UA159 |
37.975 |
99.371 |
0.377 |
| comA | Streptococcus mitis NCTC 12261 |
39.597 |
93.711 |
0.371 |
| comA | Streptococcus pneumoniae D39 |
38.926 |
93.711 |
0.365 |
| comA | Streptococcus pneumoniae R6 |
38.926 |
93.711 |
0.365 |
| comA | Streptococcus mitis SK321 |
38.926 |
93.711 |
0.365 |
| comA | Streptococcus pneumoniae Rx1 |
38.926 |
93.711 |
0.365 |
| comA | Streptococcus pneumoniae TIGR4 |
38.926 |
93.711 |
0.365 |