Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | JV59_RS00665 | Genome accession | NZ_CP009264 |
| Coordinates | 129845..130492 (-) | Length | 215 a.a. |
| NCBI ID | WP_006958300.1 | Uniprot ID | A0A097QHL5 |
| Organism | Vibrio coralliilyticus strain OCN014 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 124845..135492
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JV59_RS00655 (JV59_26285) | uvrA | 125894..128715 (-) | 2822 | Protein_119 | excinuclease ABC subunit UvrA | - |
| JV59_RS00660 (JV59_26290) | galU | 128855..129727 (-) | 873 | WP_006958301.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| JV59_RS00665 (JV59_26295) | qstR | 129845..130492 (-) | 648 | WP_006958300.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| JV59_RS00670 (JV59_26300) | ssb | 130774..131322 (+) | 549 | WP_006958299.1 | single-stranded DNA-binding protein | Machinery gene |
| JV59_RS00675 (JV59_00650) | csrD | 131470..133485 (+) | 2016 | WP_006958298.1 | RNase E specificity factor CsrD | - |
| JV59_RS00680 (JV59_26305) | - | 133482..134921 (+) | 1440 | WP_038509424.1 | MSHA biogenesis protein MshI | - |
Sequence
Protein
Download Length: 215 a.a. Molecular weight: 25102.09 Da Isoelectric Point: 8.7680
>NTDB_id=127841 JV59_RS00665 WP_006958300.1 129845..130492(-) (qstR) [Vibrio coralliilyticus strain OCN014]
MTKNIYTRTIYFLCEDSSQNNRFIHQIEKQLGVDIPHIEPNELMLAMQQHKHKILMIDYQNYRKLNNQIRDLPLSNKMFE
TIIFNVEKRLTTEELLCFGNLKGLFYQDDSVEAIAKGCGEIINSQNWLPRKVAAQLLHYYRHVVLSQTAPATVDLTSREI
QILRCLKTGASNMQIAEDLFISEFTVKSHLYQIFKKLSVKNRVQAIAWANQHMLS
MTKNIYTRTIYFLCEDSSQNNRFIHQIEKQLGVDIPHIEPNELMLAMQQHKHKILMIDYQNYRKLNNQIRDLPLSNKMFE
TIIFNVEKRLTTEELLCFGNLKGLFYQDDSVEAIAKGCGEIINSQNWLPRKVAAQLLHYYRHVVLSQTAPATVDLTSREI
QILRCLKTGASNMQIAEDLFISEFTVKSHLYQIFKKLSVKNRVQAIAWANQHMLS
Nucleotide
Download Length: 648 bp
>NTDB_id=127841 JV59_RS00665 WP_006958300.1 129845..130492(-) (qstR) [Vibrio coralliilyticus strain OCN014]
ATGACTAAAAACATCTATACCAGAACCATCTACTTTCTCTGTGAAGACAGCTCTCAAAACAACCGTTTCATTCATCAAAT
AGAGAAGCAGCTCGGTGTTGATATTCCGCACATTGAACCAAACGAGTTGATGCTTGCCATGCAGCAACACAAACATAAAA
TTCTAATGATAGATTACCAAAACTACAGAAAGCTCAATAATCAGATTCGAGATTTGCCTCTATCGAATAAAATGTTTGAA
ACCATAATCTTTAATGTAGAAAAAAGACTTACTACAGAAGAGCTACTGTGCTTTGGCAACTTGAAAGGATTGTTTTATCA
AGATGACTCCGTTGAAGCCATCGCTAAAGGGTGTGGTGAGATAATCAACAGTCAAAACTGGTTGCCCCGTAAAGTCGCAG
CTCAGCTACTGCATTACTATCGTCATGTTGTGCTTAGCCAGACAGCCCCTGCAACTGTGGATTTAACCTCACGTGAAATT
CAGATTCTACGCTGTTTAAAAACTGGGGCGTCCAATATGCAAATCGCAGAGGATCTGTTTATTAGTGAGTTTACTGTTAA
GTCCCACCTTTATCAGATTTTCAAAAAGCTTTCCGTTAAAAATCGTGTCCAAGCCATTGCTTGGGCTAATCAACATATGC
TGTCTTAA
ATGACTAAAAACATCTATACCAGAACCATCTACTTTCTCTGTGAAGACAGCTCTCAAAACAACCGTTTCATTCATCAAAT
AGAGAAGCAGCTCGGTGTTGATATTCCGCACATTGAACCAAACGAGTTGATGCTTGCCATGCAGCAACACAAACATAAAA
TTCTAATGATAGATTACCAAAACTACAGAAAGCTCAATAATCAGATTCGAGATTTGCCTCTATCGAATAAAATGTTTGAA
ACCATAATCTTTAATGTAGAAAAAAGACTTACTACAGAAGAGCTACTGTGCTTTGGCAACTTGAAAGGATTGTTTTATCA
AGATGACTCCGTTGAAGCCATCGCTAAAGGGTGTGGTGAGATAATCAACAGTCAAAACTGGTTGCCCCGTAAAGTCGCAG
CTCAGCTACTGCATTACTATCGTCATGTTGTGCTTAGCCAGACAGCCCCTGCAACTGTGGATTTAACCTCACGTGAAATT
CAGATTCTACGCTGTTTAAAAACTGGGGCGTCCAATATGCAAATCGCAGAGGATCTGTTTATTAGTGAGTTTACTGTTAA
GTCCCACCTTTATCAGATTTTCAAAAAGCTTTCCGTTAAAAATCGTGTCCAAGCCATTGCTTGGGCTAATCAACATATGC
TGTCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio cholerae strain A1552 |
59.813 |
99.535 |
0.595 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
56.682 |
100 |
0.572 |
| qstR | Vibrio campbellii strain DS40M4 |
57.209 |
100 |
0.572 |