Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | EG09_RS22400 | Genome accession | NZ_CP010555 |
| Coordinates | 4887512..4888135 (+) | Length | 207 a.a. |
| NCBI ID | WP_003103268.1 | Uniprot ID | G3XD51 |
| Organism | Pseudomonas aeruginosa strain FRD1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4882512..4893135
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EG09_RS22385 (EG09_22385) | - | 4883202..4885670 (-) | 2469 | WP_025297613.1 | penicillin-binding protein 1A | - |
| EG09_RS22390 (EG09_22390) | pilM | 4885855..4886919 (+) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| EG09_RS22395 (EG09_22395) | pilN | 4886919..4887515 (+) | 597 | WP_015647905.1 | type 4a pilus biogenesis protein PilN | Machinery gene |
| EG09_RS22400 (EG09_22400) | pilO | 4887512..4888135 (+) | 624 | WP_003103268.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EG09_RS22405 (EG09_22405) | comL/pilP | 4888132..4888656 (+) | 525 | WP_003095836.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| EG09_RS22410 (EG09_22410) | pilQ | 4888710..4890854 (+) | 2145 | WP_003146401.1 | type 4a pilus secretin PilQ | Machinery gene |
| EG09_RS22415 (EG09_22415) | aroK | 4890866..4891384 (+) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| EG09_RS22420 (EG09_22420) | aroB | 4891434..4892540 (+) | 1107 | WP_003162482.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 22819.26 Da Isoelectric Point: 4.7787
>NTDB_id=124111 EG09_RS22400 WP_003103268.1 4887512..4888135(+) (pilO) [Pseudomonas aeruginosa strain FRD1]
MSLASSLESLRKIDINDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLSDMQAQLEQQAAEEETLKQQFSTKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPVAPGSTSKLRMSILAKTYRYNDKGLKK
MSLASSLESLRKIDINDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLSDMQAQLEQQAAEEETLKQQFSTKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPVAPGSTSKLRMSILAKTYRYNDKGLKK
Nucleotide
Download Length: 624 bp
>NTDB_id=124111 EG09_RS22400 WP_003103268.1 4887512..4888135(+) (pilO) [Pseudomonas aeruginosa strain FRD1]
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGATATCAACGATCTCGACCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTGAGTGACA
TGCAGGCTCAGCTCGAACAGCAGGCCGCGGAAGAGGAGACGCTCAAGCAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAAGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGCCTGGGCAGCGGCCTGGAGTTCGAGGAAATCAAGCTGCTTC
CCGAGGTTGCCCAGCAGTTCTACATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTCACCCTGCATGACTTCGAGATCAAGCCGGTCGCGCCCGGCAGCACGTC
CAAGCTGCGCATGAGCATCCTGGCCAAGACCTATCGCTACAACGACAAGGGGCTGAAGAAATGA
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGATATCAACGATCTCGACCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTGAGTGACA
TGCAGGCTCAGCTCGAACAGCAGGCCGCGGAAGAGGAGACGCTCAAGCAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAAGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGCCTGGGCAGCGGCCTGGAGTTCGAGGAAATCAAGCTGCTTC
CCGAGGTTGCCCAGCAGTTCTACATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTCACCCTGCATGACTTCGAGATCAAGCCGGTCGCGCCCGGCAGCACGTC
CAAGCTGCGCATGAGCATCCTGGCCAAGACCTATCGCTACAACGACAAGGGGCTGAAGAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
46.114 |
93.237 |
0.43 |
| pilO | Acinetobacter baumannii D1279779 |
43.979 |
92.271 |
0.406 |
| comO/pilO | Acinetobacter baylyi ADP1 |
43.455 |
92.271 |
0.401 |