Detailed information
Bioinformatically predicted
Overview
| Name | comB7 | Type | Machinery gene |
| Locus tag | EG65_RS00205 | Genome accession | NZ_CP007603 |
| Coordinates | 37765..37878 (+) | Length | 37 a.a. |
| NCBI ID | WP_001217873.1 | Uniprot ID | G2MCV1 |
| Organism | Helicobacter pylori J166 | ||
| Function | transformation-associated type IV transport system (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 32765..42878
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EG65_RS00180 (EG65_00195) | - | 32818..35043 (+) | 2226 | WP_026938507.1 | AAA family ATPase | - |
| EG65_RS00185 (EG65_00200) | panD | 35033..35386 (+) | 354 | WP_000142236.1 | aspartate 1-decarboxylase | - |
| EG65_RS00190 (EG65_00205) | - | 35389..35691 (+) | 303 | WP_000347926.1 | YbaB/EbfC family nucleoid-associated protein | - |
| EG65_RS00195 (EG65_00210) | - | 35691..36686 (+) | 996 | WP_026938506.1 | PDZ domain-containing protein | - |
| EG65_RS00200 (EG65_00215) | comB6 | 36694..37749 (+) | 1056 | WP_026938505.1 | P-type conjugative transfer protein TrbL | Machinery gene |
| EG65_RS00205 | comB7 | 37765..37878 (+) | 114 | WP_001217873.1 | hypothetical protein | Machinery gene |
| EG65_RS00210 (EG65_00225) | comB8 | 37875..38618 (+) | 744 | WP_026938504.1 | type IV secretion system protein | Machinery gene |
| EG65_RS00215 (EG65_00230) | comB9 | 38618..39601 (+) | 984 | WP_026938503.1 | TrbG/VirB9 family P-type conjugative transfer protein | Machinery gene |
| EG65_RS00220 (EG65_00235) | comB10 | 39594..40724 (+) | 1131 | WP_026938502.1 | DNA type IV secretion system protein ComB10 | Machinery gene |
| EG65_RS00225 (EG65_00240) | - | 40794..42206 (+) | 1413 | WP_026938501.1 | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | - |
Sequence
Protein
Download Length: 37 a.a. Molecular weight: 4325.25 Da Isoelectric Point: 9.3572
>NTDB_id=121539 EG65_RS00205 WP_001217873.1 37765..37878(+) (comB7) [Helicobacter pylori J166]
MRIFFVIMGLVFFGCTSKVHEMKKSPCTLYENRLNLA
MRIFFVIMGLVFFGCTSKVHEMKKSPCTLYENRLNLA
Nucleotide
Download Length: 114 bp
>NTDB_id=121539 EG65_RS00205 WP_001217873.1 37765..37878(+) (comB7) [Helicobacter pylori J166]
ATGAGAATTTTTTTTGTTATTATGGGACTTGTGTTTTTTGGTTGCACCAGTAAGGTGCATGAGATGAAAAAAAGCCCTTG
CACATTGTATGAAAACAGGTTAAATCTCGCATGA
ATGAGAATTTTTTTTGTTATTATGGGACTTGTGTTTTTTGGTTGCACCAGTAAGGTGCATGAGATGAAAAAAAGCCCTTG
CACATTGTATGAAAACAGGTTAAATCTCGCATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB7 | Helicobacter pylori P1 |
100 |
100 |
1 |