Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   DK43_RS06570 Genome accession   NZ_CP007573
Coordinates   1357559..1358563 (-) Length   334 a.a.
NCBI ID   WP_003027685.1    Uniprot ID   A0AAI9NJ44
Organism   Streptococcus anginosus strain SA1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1352559..1363563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK43_RS06550 (DK43_06730) micA 1353712..1354413 (-) 702 WP_003027677.1 response regulator YycF Regulator
  DK43_RS06555 (DK43_06735) - 1354698..1355039 (-) 342 WP_003027678.1 hypothetical protein -
  DK43_RS06560 (DK43_06740) - 1355066..1356379 (-) 1314 WP_022525097.1 glycosyltransferase family 4 protein -
  DK43_RS06565 (DK43_06745) - 1356381..1357379 (-) 999 WP_022525098.1 glycosyltransferase -
  DK43_RS06570 (DK43_06750) ccpA 1357559..1358563 (-) 1005 WP_003027685.1 catabolite control protein A Regulator
  DK43_RS06575 (DK43_06755) - 1358827..1359909 (+) 1083 WP_003027688.1 Xaa-Pro peptidase family protein -
  DK43_RS06580 (DK43_06760) - 1360276..1362741 (-) 2466 WP_022525099.1 alkaline phosphatase family protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37054.10 Da        Isoelectric Point: 5.5382

>NTDB_id=121214 DK43_RS06570 WP_003027685.1 1357559..1358563(-) (ccpA) [Streptococcus anginosus strain SA1]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITSSYFA
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVERLTKNNQKIAFVSGPLVDDINGKIRLAGYKEALKKAKLTYSEGLVFESKYSYDDGYQLAERVIASK
ATAAFVTGDELAAGLLNGLSDKDVNIPEDFEIITSDDSQVARFTRPNLTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
VLAHGLIERRSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=121214 DK43_RS06570 WP_003027685.1 1357559..1358563(-) (ccpA) [Streptococcus anginosus strain SA1]
ATGAACACAGACGATACAGTAACCATTTATGATGTCGCGCGTGAAGCGGGAGTTTCAATGGCAACCGTTAGCCGTGTGGT
AAATGGAAATAAAAATGTAAAGGAAAATACAAGAAAAAAAGTCTTGGAAGTGATTGACCGCTTGGATTACCGCCCAAATG
CGGTAGCGCGTGGTCTTGCTAGCAAAAAGACGACGACTGTTGGAGTTGTCATTCCAAATATCACAAGCAGTTATTTTGCA
ACGCTTGCAAAAGGAATTGATGATATCGCAGAGATGTACAAATATAATATTGTCTTAGCCAATAGTGATGAAGATGATGA
CAAAGAAGTTTCTGTTGTCAATACACTGTTCTCAAAACAAGTGGACGGTATTATCTTTATGGGCTATCATTTGACAGAAA
AAATTCGTTCTGAGTTTTCTCGTTCACGGACGCCAGTTGTGCTTGCAGGTACAGTTGATGTCGAGCATCAATTGCCAAGT
GTTAATATTGATTACAAACAAGCAACTATAGATGCAGTTGAACGTCTTACAAAAAATAATCAAAAAATTGCTTTTGTAAG
CGGACCTTTGGTGGATGATATCAATGGTAAGATTCGTTTAGCTGGATACAAAGAAGCTTTGAAGAAAGCTAAACTTACTT
ATAGTGAAGGATTGGTTTTTGAGTCAAAATATAGCTATGATGATGGTTATCAATTAGCAGAACGGGTCATTGCTTCTAAA
GCTACAGCAGCTTTTGTGACTGGTGATGAGCTGGCGGCTGGGCTGTTAAATGGTTTATCTGACAAGGATGTAAATATACC
AGAAGATTTTGAAATCATCACTAGCGATGATTCGCAGGTAGCACGCTTTACTCGTCCAAATTTGACAACTATTGGTCAGC
CTTTGTATGACCTTGGTGCGATTAGTATGCGCATGCTGACTAAGATTATGCACAAGGAAGAGCTGGAAGAACGCGAAGTA
GTATTAGCTCATGGTCTTATTGAGCGCCGTTCAACAAGAAAGTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

90.419

100

0.904
  ccpA Streptococcus pneumoniae D39

88.323

100

0.883
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

99.102

0.569

Multiple sequence alignment