Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DK43_RS00095 Genome accession   NZ_CP007573
Coordinates   21305..22072 (-) Length   255 a.a.
NCBI ID   WP_003029516.1    Uniprot ID   A0AAI9J817
Organism   Streptococcus anginosus strain SA1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 16305..27072
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK43_RS00070 (DK43_00075) ychF 16459..17574 (-) 1116 WP_003029509.1 redox-regulated ATPase YchF -
  DK43_RS00075 (DK43_00080) - 17720..18220 (+) 501 WP_003029510.1 YehR family protein -
  DK43_RS00080 (DK43_00085) - 18244..18441 (-) 198 WP_003029511.1 DUF951 family protein -
  DK43_RS00085 (DK43_00090) dnaN 18441..19577 (-) 1137 WP_003029513.1 DNA polymerase III subunit beta -
  DK43_RS00090 (DK43_00095) dnaA 19734..21077 (-) 1344 WP_003029515.1 chromosomal replication initiator protein DnaA -
  DK43_RS00095 (DK43_00100) spo0J 21305..22072 (-) 768 WP_003029516.1 ParB/RepB/Spo0J family partition protein Regulator
  DK43_RS00100 (DK43_00105) htrA 22127..23317 (-) 1191 WP_003029517.1 trypsin-like peptidase domain-containing protein Regulator
  DK43_RS00105 (DK43_00110) rlmH 23510..23989 (+) 480 WP_003029518.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DK43_RS09895 (DK43_00120) - 24271..24417 (+) 147 WP_003029519.1 bacteriocin -
  DK43_RS00120 (DK43_00125) comD/comD2 24435..25760 (+) 1326 WP_218015592.1 GHKL domain-containing protein Regulator
  DK43_RS00125 (DK43_00130) comE 25760..26509 (+) 750 WP_003029521.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29633.21 Da        Isoelectric Point: 9.3508

>NTDB_id=121183 DK43_RS00095 WP_003029516.1 21305..22072(-) (spo0J) [Streptococcus anginosus strain SA1]
MEKYQYIALKDIQTNPYQPRKEFSEEKITELANSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIALTMGKSRPYITNSVRLLNLPSNIIEAVKEGNISQGHA
RLLINLSEKDQIHWFEKILSQELSVRKLEKQLHPKRTKTVTKDKNQLFIKEEEERLKKIFGTDISLQFSKQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=121183 DK43_RS00095 WP_003029516.1 21305..22072(-) (spo0J) [Streptococcus anginosus strain SA1]
ATGGAAAAATATCAATATATTGCACTTAAGGACATTCAAACTAATCCTTACCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTACTGAGCTTGCTAATTCTATAAAAGAACATGGGATTATTCAGCCCATTATTGTACGAAAATCTCCGATAATTGGTT
ATGAATTGCTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACAAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCTATCATTGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTAATTGACAAGGGATTGACACACAAAGAAATCGCTCTAACAATGGGAAAATCTCGCCCTTACATTA
CAAATTCTGTTCGTTTATTAAACTTACCATCCAATATCATTGAAGCAGTAAAAGAAGGAAATATCTCTCAAGGACATGCT
CGCCTGCTTATCAATCTCTCAGAAAAAGATCAAATTCACTGGTTTGAAAAAATTCTATCTCAAGAACTTTCAGTTAGAAA
ACTAGAAAAACAATTGCACCCAAAACGAACAAAAACTGTAACAAAAGATAAAAATCAACTTTTTATCAAAGAAGAAGAAG
AAAGGTTAAAAAAGATATTCGGTACAGATATTTCACTCCAATTTTCTAAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGAATTATTGACAGCTTTAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(146-190)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

52.918

100

0.533

Multiple sequence alignment