Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | NTHIC486_RS08895 | Genome accession | NZ_CP007471 |
| Coordinates | 1836991..1838112 (+) | Length | 373 a.a. |
| NCBI ID | WP_044345925.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain C486 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1831991..1843112
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NTHIC486_RS08880 (NTHIC486_01779) | leuC | 1832136..1833545 (-) | 1410 | WP_032824542.1 | 3-isopropylmalate dehydratase large subunit | - |
| NTHIC486_RS08885 (NTHIC486_01780) | leuB | 1833721..1834800 (-) | 1080 | WP_044345922.1 | 3-isopropylmalate dehydrogenase | - |
| NTHIC486_RS08890 (NTHIC486_01781) | leuA | 1834886..1836433 (-) | 1548 | WP_044345923.1 | 2-isopropylmalate synthase | - |
| NTHIC486_RS08895 (NTHIC486_01782) | dprA | 1836991..1838112 (+) | 1122 | WP_044345925.1 | DNA-processing protein DprA | Machinery gene |
| NTHIC486_RS08900 (NTHIC486_01783) | yaaA | 1838165..1838941 (+) | 777 | WP_005655962.1 | peroxide stress protein YaaA | - |
| NTHIC486_RS08905 (NTHIC486_01784) | - | 1838934..1839515 (+) | 582 | WP_044345926.1 | hypothetical protein | - |
| NTHIC486_RS08910 (NTHIC486_01785) | pfkA | 1839611..1840576 (+) | 966 | WP_005664214.1 | 6-phosphofructokinase | - |
| NTHIC486_RS08915 (NTHIC486_01786) | smpB | 1840820..1841305 (+) | 486 | WP_005647965.1 | SsrA-binding protein SmpB | - |
| NTHIC486_RS08920 (NTHIC486_01787) | fis | 1841400..1841699 (-) | 300 | WP_005651583.1 | DNA-binding transcriptional regulator Fis | - |
| NTHIC486_RS08925 (NTHIC486_01788) | dusB | 1841693..1842673 (-) | 981 | WP_044345927.1 | tRNA dihydrouridine synthase DusB | - |
Sequence
Protein
Download Length: 373 a.a. Molecular weight: 41641.72 Da Isoelectric Point: 6.2337
>NTDB_id=119755 NTHIC486_RS08895 WP_044345925.1 1836991..1838112(+) (dprA) [Haemophilus influenzae strain C486]
MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEAKFIEPALVWSQKEGNHLVNY
FSPFYPFLLKQTASFPPLLFVKGNLTALSQRQMAMVGSRYCTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVV
NIQGQTIAVLGSGLEQIYPSKHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRDRIISGLSVGTLVVEATEKSGSLITA
RYALEQNREVFAVPGNIQNESSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFDQIAVPNYTPPPDPRRLVEAP
SHPKLYSRIGYTPVSIDDLAEEFNLSVDVLLVQLLDLELQDLIISENGLYKRV
MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEAKFIEPALVWSQKEGNHLVNY
FSPFYPFLLKQTASFPPLLFVKGNLTALSQRQMAMVGSRYCTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVV
NIQGQTIAVLGSGLEQIYPSKHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRDRIISGLSVGTLVVEATEKSGSLITA
RYALEQNREVFAVPGNIQNESSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFDQIAVPNYTPPPDPRRLVEAP
SHPKLYSRIGYTPVSIDDLAEEFNLSVDVLLVQLLDLELQDLIISENGLYKRV
Nucleotide
Download Length: 1122 bp
>NTDB_id=119755 NTHIC486_RS08895 WP_044345925.1 1836991..1838112(+) (dprA) [Haemophilus influenzae strain C486]
ATGAATGACATTACCTACACATTACTCCGTTTAATGCAAGTACCTAAACTTGGCGGCGTTGGCATTGATAAAATTTTGTC
CAATATTACCTTAAATGAATTACTTAATTATGATGATGTTGCTTTCCGACAAATGGGGTGGGGAGCCATTCAAATTCGCC
GTTGGTTCAAGCCTGAAGCAAAATTTATTGAGCCTGCACTTGTGTGGTCACAAAAAGAGGGAAATCATTTAGTGAATTAT
TTTTCCCCTTTTTATCCCTTTTTGTTGAAACAGACCGCAAGTTTTCCGCCACTATTATTTGTAAAAGGAAATTTAACCGC
ACTTTCACAACGCCAAATGGCAATGGTTGGAAGCCGTTATTGCACGACTTACGGAGAATATTGGGCAAAACATTTTGCGA
CAGAACTTTCATTAGCTGGCTTTACGATTACTAGTGGACTTGCATTAGGAATTGATGGACATTGCCATCAAGCTGTCGTC
AATATTCAAGGACAAACTATTGCGGTTTTAGGCAGTGGATTAGAACAAATCTATCCCTCTAAACATCAAAGATTATCAGC
ACAAATCATCGAAAATAATGGCGCATTAGTCTCTGAGTTCTTACCAAACCAAGCCCCCATTGCCGCTAATTTCCCACGTC
GTGATCGGATTATTAGCGGGCTTTCAGTTGGCACGCTTGTTGTTGAAGCCACAGAAAAAAGCGGCTCGCTTATTACTGCG
CGATATGCGTTGGAACAAAACCGAGAGGTTTTTGCTGTGCCGGGAAACATTCAAAATGAATCAAGTCAAGGTTGTCATCG
CCTAATTAAACAAGGTGCAATGTTAGTAGAAAATGCTAAAGATATTTTGGAAACCCTCTACCAACATTCTATCCATAGCC
AAACTGAAATCGATTTTGACCAGATCGCCGTGCCTAATTACACGCCACCACCTGATCCTCGTCGATTAGTAGAAGCACCA
AGCCACCCGAAACTTTATTCGCGTATTGGTTACACGCCTGTGAGCATTGATGATTTAGCGGAAGAATTTAATTTAAGCGT
CGATGTTTTGCTTGTTCAGTTGCTCGATCTTGAGTTGCAAGATCTTATCATAAGTGAAAATGGGTTATATAAACGCGTTT
AG
ATGAATGACATTACCTACACATTACTCCGTTTAATGCAAGTACCTAAACTTGGCGGCGTTGGCATTGATAAAATTTTGTC
CAATATTACCTTAAATGAATTACTTAATTATGATGATGTTGCTTTCCGACAAATGGGGTGGGGAGCCATTCAAATTCGCC
GTTGGTTCAAGCCTGAAGCAAAATTTATTGAGCCTGCACTTGTGTGGTCACAAAAAGAGGGAAATCATTTAGTGAATTAT
TTTTCCCCTTTTTATCCCTTTTTGTTGAAACAGACCGCAAGTTTTCCGCCACTATTATTTGTAAAAGGAAATTTAACCGC
ACTTTCACAACGCCAAATGGCAATGGTTGGAAGCCGTTATTGCACGACTTACGGAGAATATTGGGCAAAACATTTTGCGA
CAGAACTTTCATTAGCTGGCTTTACGATTACTAGTGGACTTGCATTAGGAATTGATGGACATTGCCATCAAGCTGTCGTC
AATATTCAAGGACAAACTATTGCGGTTTTAGGCAGTGGATTAGAACAAATCTATCCCTCTAAACATCAAAGATTATCAGC
ACAAATCATCGAAAATAATGGCGCATTAGTCTCTGAGTTCTTACCAAACCAAGCCCCCATTGCCGCTAATTTCCCACGTC
GTGATCGGATTATTAGCGGGCTTTCAGTTGGCACGCTTGTTGTTGAAGCCACAGAAAAAAGCGGCTCGCTTATTACTGCG
CGATATGCGTTGGAACAAAACCGAGAGGTTTTTGCTGTGCCGGGAAACATTCAAAATGAATCAAGTCAAGGTTGTCATCG
CCTAATTAAACAAGGTGCAATGTTAGTAGAAAATGCTAAAGATATTTTGGAAACCCTCTACCAACATTCTATCCATAGCC
AAACTGAAATCGATTTTGACCAGATCGCCGTGCCTAATTACACGCCACCACCTGATCCTCGTCGATTAGTAGAAGCACCA
AGCCACCCGAAACTTTATTCGCGTATTGGTTACACGCCTGTGAGCATTGATGATTTAGCGGAAGAATTTAATTTAAGCGT
CGATGTTTTGCTTGTTCAGTTGCTCGATCTTGAGTTGCAAGATCTTATCATAAGTGAAAATGGGTTATATAAACGCGTTT
AG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Haemophilus influenzae Rd KW20 |
99.464 |
100 |
0.995 |
| dprA | Glaesserella parasuis strain SC1401 |
51.724 |
93.298 |
0.483 |
| dprA | Vibrio campbellii strain DS40M4 |
43.351 |
100 |
0.437 |
| dprA | Vibrio cholerae strain A1552 |
43.014 |
97.855 |
0.421 |
| dprA | Legionella pneumophila strain ERS1305867 |
40.346 |
93.029 |
0.375 |