Detailed information NTG0119422

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: SALWKB2_RS01250
• Genome accession: NZ_CP007446
• Coordinates: 289985..291163 (+)
• Length: 392 a.a.
• NCBI ID: WP_025329886.1
• Uniprot ID: -
• Organism: Snodgrassella alvi wkB2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 284985..296163

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SALWKB2_RS01230 (SALWKB2_0233)	-	285970..287199 (+)	1230	WP_080690477.1	PilT/PilU family type 4a pilus ATPase	-
SALWKB2_RS01235 (SALWKB2_0234)	murU	287331..288032 (+)	702	WP_025329883.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
SALWKB2_RS01240 (SALWKB2_0235)	ruvC	288163..288714 (+)	552	WP_025329884.1	crossover junction endodeoxyribonuclease RuvC	-
SALWKB2_RS01245 (SALWKB2_0236)	-	288812..289597 (-)	786	WP_025329885.1	DUF2071 domain-containing protein	-
SALWKB2_RS01250 (SALWKB2_0238)	dprA	289985..291163 (+)	1179	WP_025329886.1	DNA-processing protein DprA	Machinery gene
SALWKB2_RS01255 (SALWKB2_0239)	-	291175..291633 (+)	459	WP_025329887.1	DUF494 family protein	-
SALWKB2_RS01260 (SALWKB2_0240)	topA	291775..294069 (+)	2295	WP_025329888.1	type I DNA topoisomerase	-
SALWKB2_RS01265 (SALWKB2_0241)	rsmD	294148..294720 (+)	573	WP_025329889.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
SALWKB2_RS01270 (SALWKB2_0242)	-	294812..295066 (+)	255	WP_025329890.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 42189.19 Da
• Isoelectric Point: 6.4947

>NTDB_id=119422 SALWKB2_RS01250 WP_025329886.1 289985..291163(+) (dprA) [Snodgrassella alvi wkB2]
MDTQERLAWIELALTPFVGAETFLRIIKYFGSAQNALSTSAAEISPFCQRQISKYWHSDVAKQATEAAIEWEQAHTDARL
LLLADNDFPAMLTKGLTPPPLLFVRGDSQCLHQPALSIVGSRHATPQAMRITHDFAAALARKGVTIISGMASGADTAAHQ
GALQAMGTTVAVWGTGIDRVYPARNKNLATQIAAHGCIISEFPLGTRPSPGNFPRRNRLIAALSQGTLVVEAATESGSLI
TARLAGEMGREVMAIPGSIDNPLSKGCHALIKQGAKLVENLEDILQECPRLLQKKDLQSYSNRPHLQTDDISKSSTNTDS
SEDSLSVHSPDCILNPMEQQVLDGLGYGIMHPDMLVTALGMAATDVYAHLVTLELGGWITTLPGGCYQRIKS

Nucleotide

• Length: 1179 bp

>NTDB_id=119422 SALWKB2_RS01250 WP_025329886.1 289985..291163(+) (dprA) [Snodgrassella alvi wkB2]
ATGGATACACAAGAACGCCTAGCCTGGATTGAATTGGCATTGACTCCGTTTGTAGGTGCTGAAACTTTTCTTCGCATAAT
TAAATATTTTGGTTCCGCGCAAAATGCTCTTAGTACATCGGCTGCTGAAATATCGCCTTTTTGTCAACGGCAAATCAGTA
AGTATTGGCATAGTGATGTAGCAAAGCAGGCAACTGAAGCAGCTATAGAATGGGAGCAAGCGCATACTGATGCACGTTTA
TTACTACTGGCAGATAATGATTTTCCGGCAATGCTGACCAAGGGTTTAACACCGCCTCCATTATTGTTTGTTCGTGGTGA
TAGCCAGTGTTTGCATCAACCTGCTTTATCAATTGTTGGCAGTCGGCATGCTACACCACAAGCCATGCGCATTACACATG
ATTTTGCAGCCGCACTGGCACGGAAAGGTGTAACAATTATTTCAGGCATGGCTAGTGGGGCAGATACAGCAGCACATCAG
GGTGCTTTGCAGGCAATGGGTACAACAGTGGCAGTTTGGGGTACAGGTATTGACAGAGTATATCCGGCACGTAACAAAAA
TTTAGCCACACAAATTGCTGCTCATGGCTGTATTATTTCTGAATTTCCTTTAGGTACTCGTCCTTCTCCAGGAAATTTTC
CGCGACGTAACCGCTTGATTGCTGCACTTAGTCAGGGTACGCTGGTAGTTGAAGCCGCAACTGAATCGGGCTCATTGATT
ACTGCAAGACTGGCCGGAGAAATGGGGCGGGAAGTTATGGCGATACCGGGTTCTATTGATAACCCTTTAAGTAAAGGCTG
CCACGCATTAATCAAACAGGGTGCCAAATTAGTAGAAAATCTGGAAGATATTTTGCAGGAATGTCCACGCCTCTTGCAAA
AAAAAGATTTGCAATCATATAGCAATCGTCCTCATCTGCAAACTGATGATATAAGTAAATCATCTACAAATACTGATAGT
TCAGAAGATTCATTATCAGTTCATTCACCAGATTGTATACTTAACCCGATGGAGCAGCAGGTGCTGGACGGACTGGGTTA
CGGCATAATGCATCCGGATATGTTAGTTACAGCACTTGGCATGGCTGCTACAGATGTGTATGCTCATCTCGTGACATTGG
AGCTTGGTGGCTGGATTACCACTCTGCCAGGCGGCTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (76-279)

• DprA winged helix domain (DprA_WH) (334-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	58.04	100	0.589
dprA	Neisseria meningitidis MC58	58.04	100	0.589
dprA	Neisseria gonorrhoeae strain FA1090	56.543	100	0.584
dprA	Neisseria gonorrhoeae MS11	56.296	100	0.582