Detailed information NTG0118258

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AJ82_RS16445
• Genome accession: NZ_CP007244
• Coordinates: 3416066..3417229 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis TrigoCor1448
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3411066..3422229

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AJ82_RS16415 (AJ82_18410)	-	3411330..3411749 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
AJ82_RS16420 (AJ82_18415)	comFC	3411823..3412512 (-)	690	WP_199022660.1	phosphoribosyltransferase family protein	Machinery gene
AJ82_RS16425 (AJ82_18420)	-	3412518..3412802 (-)	285	WP_007407481.1	competence protein ComFB	-
AJ82_RS16430 (AJ82_18425)	comFA	3412860..3414245 (-)	1386	WP_025285354.1	DEAD/DEAH box helicase	Machinery gene
AJ82_RS16435 (AJ82_18430)	-	3414354..3415202 (-)	849	WP_003151387.1	DegV family protein	-
AJ82_RS16440 (AJ82_18435)	degU	3415300..3415989 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AJ82_RS16445 (AJ82_18440)	degS	3416066..3417229 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
AJ82_RS16450 (AJ82_18445)	-	3417452..3418099 (+)	648	WP_007614107.1	YigZ family protein	-
AJ82_RS16455 (AJ82_18450)	-	3418104..3419339 (+)	1236	WP_025285355.1	LCP family protein	-
AJ82_RS16460 (AJ82_18455)	-	3419438..3420514 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
AJ82_RS16465 (AJ82_18460)	-	3420647..3421843 (-)	1197	WP_025285356.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=118258 AJ82_RS16445 WP_007407484.1 3416066..3417229(-) (degS) [Bacillus velezensis TrigoCor1448]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=118258 AJ82_RS16445 WP_007407484.1 3416066..3417229(-) (degS) [Bacillus velezensis TrigoCor1448]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951