Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACOFKU_RS10105 Genome accession   NZ_OZ241361
Coordinates   2181114..2181497 (-) Length   127 a.a.
NCBI ID   WP_068660884.1    Uniprot ID   A0A9J7ADK6
Organism   MAG: Bacterioplanoides sp. isolate a8483998-2d78-4028-8a03-01e39642ae96     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2176114..2186497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOFKU_RS10085 - 2177131..2178018 (-) 888 WP_419812067.1 CheR family methyltransferase -
  ACOFKU_RS10090 - 2178033..2180090 (-) 2058 WP_419812068.1 methyl-accepting chemotaxis protein -
  ACOFKU_RS10095 - 2180190..2180714 (-) 525 WP_419812069.1 chemotaxis protein CheW -
  ACOFKU_RS10100 pilH 2180716..2181081 (-) 366 WP_255857938.1 twitching motility response regulator PilH -
  ACOFKU_RS10105 pilG 2181114..2181497 (-) 384 WP_068660884.1 twitching motility response regulator PilG Regulator
  ACOFKU_RS10110 gshB 2181721..2182665 (+) 945 WP_419812070.1 glutathione synthase -
  ACOFKU_RS10115 - 2182786..2183664 (+) 879 WP_419812071.1 energy transducer TonB -
  ACOFKU_RS10120 - 2183693..2184250 (+) 558 WP_419812072.1 YqgE/AlgH family protein -
  ACOFKU_RS10125 ruvX 2184250..2184702 (+) 453 WP_419812073.1 Holliday junction resolvase RuvX -
  ACOFKU_RS10130 pyrR 2184714..2185220 (+) 507 WP_419812074.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACOFKU_RS10135 - 2185231..2186229 (+) 999 WP_419812075.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14195.47 Da        Isoelectric Point: 7.8169

>NTDB_id=1170823 ACOFKU_RS10105 WP_068660884.1 2181114..2181497(-) (pilG) [MAG: Bacterioplanoides sp. isolate a8483998-2d78-4028-8a03-01e39642ae96]
MDDNFQNVKVMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADTHPDIIFVDIMMPRLDGYQTCALIKNNSKFK
STPVIMLSSKDGLFDKAKGRIVGSDEYLTKPFSKEELLGSIRQYVKS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1170823 ACOFKU_RS10105 WP_068660884.1 2181114..2181497(-) (pilG) [MAG: Bacterioplanoides sp. isolate a8483998-2d78-4028-8a03-01e39642ae96]
ATGGACGATAACTTTCAGAATGTAAAAGTCATGGTCATCGACGACAGTAAAACCATTCGTCGTACGGCTGAGACGCTGCT
AAAAAAAGTTGGCTGCGAAGTGATCACAGCAACCGATGGTTTTGATGCACTCGCAAAGATTGCTGACACTCATCCGGATA
TCATTTTTGTTGATATCATGATGCCCCGCCTGGATGGCTACCAGACCTGCGCCTTGATTAAAAATAACTCCAAATTCAAG
TCAACTCCGGTCATTATGTTGTCCAGTAAAGATGGTTTATTCGACAAGGCAAAAGGCCGTATTGTTGGTTCAGATGAATA
TCTGACCAAACCATTCAGCAAAGAAGAACTGCTGGGTTCAATTCGCCAGTATGTAAAATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.953

100

0.78
  pilH Synechocystis sp. PCC 6803

41.525

92.913

0.386
  vicR Streptococcus mutans UA159

41.525

92.913

0.386
  micA Streptococcus pneumoniae Cp1015

38.983

92.913

0.362

Multiple sequence alignment