Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   ACLV7Z_RS03615 Genome accession   NZ_OZ217343
Coordinates   698071..700029 (+) Length   652 a.a.
NCBI ID   WP_218774217.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis G22     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 693071..705029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Z_RS03590 (SMIG22_06940) - 693225..693719 (+) 495 WP_218774221.1 YiiX/YebB-like N1pC/P60 family cysteine hydrolase -
  ACLV7Z_RS03595 (SMIG22_06950) - 693703..694353 (+) 651 WP_218774220.1 DUF1803 domain-containing protein -
  ACLV7Z_RS03600 (SMIG22_06960) - 694453..694647 (+) 195 WP_000051195.1 CsbD family protein -
  ACLV7Z_RS03605 (SMIG22_06970) - 694692..696137 (-) 1446 WP_218774219.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase -
  ACLV7Z_RS03610 (SMIG22_06980) - 696243..697865 (+) 1623 WP_218774218.1 putative polysaccharide biosynthesis protein -
  ACLV7Z_RS03615 (SMIG22_06990) amiA3 698071..700029 (+) 1959 WP_218774217.1 peptide ABC transporter substrate-binding protein Regulator
  ACLV7Z_RS03620 (SMIG22_07000) - 700344..700799 (+) 456 WP_218774216.1 hypothetical protein -
  ACLV7Z_RS03625 (SMIG22_07010) - 700965..702059 (+) 1095 WP_218774215.1 cystathionine gamma-synthase -
  ACLV7Z_RS03630 (SMIG22_07020) - 702067..703233 (+) 1167 WP_218774214.1 MalY/PatB family protein -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72384.86 Da        Isoelectric Point: 4.9425

>NTDB_id=1170201 ACLV7Z_RS03615 WP_218774217.1 698071..700029(+) (amiA3) [Streptococcus mitis isolate S. mitis G22]
MKKSKSKYLTLAGLVLGTGILLSACGNSSTGSKTYNYVYSSDPSSLNYLAENRATTNDIVTNLVDGLMENDQYGNYVPSL
AEDWSVSKDGLTYTYKLRKDAKWFTSEGEEYAPVTAQDFVTGLKYAADKKSEALYLVQDSVAGLDDYITGKTSDFSTVGV
KALDDQTVQYTLARPEPYWNSKTTSTILFPVNADFLKSKGDDFGKVDPSSILYNGPFLMKALVSKSVIEYKKNPNYWDAK
NVLVDDVKLAYYDGSDQDALVRNFTDGAYSYARLYPNSSSYEGIKEKYKDNIIYSMQNATSYFLNFNLDRQSYKFTSKTS
DAEKKSTQEAVLNKNFRQAINFAYDRTAYGAQTQGEDGATKILRNLVVPPTFVSIKGKDFGEVVASKMVNYGKEWQGINF
ADAQDPYYNPEKAKAKFAEAKKELEAKGVTFPIHLDMTVDQANKKGVQEVSSMKQSIEAALGAENVVIDIQQLSTEDADN
TGYLAPTAAQKDYDLYNGGWSADYLDPSSYLDIFSVKNGGVLQNLGLEPGEANDKAKAVGLDVYTQMLEEANKEQDPAKR
YEKYADVQAWLVDSSLAIPNVSLGGTPGLRKTVPFSAPYSLAGNKGVESYKYLKVQDKIVTTDEYAKAREKWLKEKEESN
KKAQEELAKHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=1170201 ACLV7Z_RS03615 WP_218774217.1 698071..700029(+) (amiA3) [Streptococcus mitis isolate S. mitis G22]
ATGAAAAAGTCTAAGAGCAAATATCTAACCTTGGCAGGTCTTGTCCTGGGTACAGGAATTTTATTGAGCGCGTGTGGAAA
TTCTAGCACAGGATCAAAAACCTATAACTATGTTTATTCAAGTGATCCATCTAGTTTGAACTATCTAGCAGAAAACCGTG
CAACAACCAATGATATTGTGACCAATCTGGTAGATGGTCTCATGGAAAATGACCAATACGGGAACTATGTGCCATCCTTG
GCAGAGGATTGGAGTGTTTCTAAGGACGGTTTGACCTATACCTACAAACTTCGTAAGGATGCCAAGTGGTTTACTTCTGA
GGGAGAAGAATATGCACCTGTAACTGCCCAAGATTTTGTGACAGGTTTGAAATATGCGGCTGATAAAAAATCAGAAGCCT
TGTATCTAGTGCAGGACTCTGTCGCAGGCTTGGATGACTATATCACTGGGAAAACAAGCGACTTTTCAACTGTCGGAGTC
AAGGCTCTTGATGACCAAACGGTTCAATATACCTTGGCTAGACCAGAACCTTACTGGAACTCAAAAACGACATCAACCAT
TCTCTTCCCAGTCAATGCAGATTTCTTAAAATCAAAAGGGGATGATTTTGGGAAGGTTGACCCATCTAGCATTTTGTACA
ATGGACCTTTCTTGATGAAAGCCCTTGTTTCAAAATCTGTCATCGAATACAAGAAAAATCCTAACTACTGGGATGCGAAA
AATGTCCTTGTCGATGATGTCAAATTGGCCTATTATGATGGTAGTGACCAAGATGCTCTTGTTCGTAACTTTACAGACGG
AGCCTACAGCTACGCTCGTCTCTATCCGAATAGTTCAAGTTATGAAGGGATTAAAGAAAAATACAAAGATAATATCATCT
ATAGTATGCAGAACGCTACGTCTTACTTCTTAAACTTTAATCTGGATAGACAATCTTATAAGTTTACTTCCAAGACAAGT
GATGCTGAAAAGAAATCAACTCAGGAAGCGGTTCTTAATAAAAACTTCCGTCAAGCCATTAACTTTGCCTATGACCGTAC
AGCCTACGGGGCTCAAACTCAGGGAGAAGACGGAGCGACTAAGATTTTACGTAATTTGGTTGTTCCTCCAACCTTTGTAA
GTATCAAAGGAAAAGACTTTGGTGAAGTAGTAGCTTCTAAGATGGTCAATTATGGTAAGGAATGGCAAGGTATCAACTTT
GCAGATGCCCAAGATCCATACTATAATCCAGAAAAAGCTAAGGCTAAGTTTGCGGAAGCTAAGAAAGAGCTAGAAGCCAA
GGGAGTAACCTTCCCTATCCACTTAGACATGACAGTTGACCAAGCTAATAAAAAAGGTGTTCAAGAAGTAAGCTCTATGA
AGCAATCTATTGAAGCAGCCTTAGGTGCAGAAAATGTTGTAATTGACATTCAACAACTCTCTACTGAAGACGCTGATAAT
ACAGGCTATTTGGCTCCGACTGCAGCCCAGAAAGATTACGATTTATACAATGGTGGTTGGAGCGCGGACTATCTCGATCC
ATCTAGCTATCTTGATATTTTTAGTGTCAAGAATGGTGGGGTTCTACAAAATCTTGGACTAGAGCCGGGTGAAGCCAATG
ACAAGGCCAAGGCGGTTGGACTGGATGTCTATACTCAAATGTTGGAAGAAGCTAATAAGGAGCAAGATCCGGCTAAACGT
TATGAGAAATATGCTGATGTTCAAGCTTGGTTGGTAGATAGTTCTCTAGCGATTCCAAATGTTTCATTGGGTGGAACACC
TGGCTTGAGAAAAACAGTTCCTTTCTCAGCACCTTATTCATTGGCTGGTAATAAAGGGGTTGAATCCTATAAATACCTCA
AAGTACAAGATAAGATTGTCACAACAGACGAATATGCAAAAGCCAGAGAAAAATGGTTGAAAGAAAAAGAAGAATCCAAT
AAAAAAGCCCAAGAAGAATTGGCAAAACATGTCAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMG 18311

57.405

100

0.577
  amiA3 Streptococcus thermophilus LMD-9

57.405

100

0.577
  amiA Streptococcus salivarius strain HSISS4

57.492

100

0.577

Multiple sequence alignment