Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ACLV7Z_RS01205 | Genome accession | NZ_OZ217343 |
| Coordinates | 226807..227760 (+) | Length | 317 a.a. |
| NCBI ID | WP_218774876.1 | Uniprot ID | - |
| Organism | Streptococcus mitis isolate S. mitis G22 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 221807..232760
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLV7Z_RS01160 (SMIG22_02270) | - | 221977..222342 (+) | 366 | WP_000286413.1 | DUF1033 family protein | - |
| ACLV7Z_RS01165 (SMIG22_02280) | comGA/cglA/cilD | 222419..223360 (+) | 942 | WP_218774872.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACLV7Z_RS01170 (SMIG22_02290) | comGB/cglB | 223308..224324 (+) | 1017 | WP_218774887.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACLV7Z_RS01175 (SMIG22_02300) | comGC/cglC | 224326..224649 (+) | 324 | WP_000738641.1 | comG operon protein ComGC | Machinery gene |
| ACLV7Z_RS01180 (SMIG22_02310) | comGD/cglD | 224612..225046 (+) | 435 | WP_033628889.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACLV7Z_RS01185 (SMIG22_02320) | comGE/cglE | 225009..225311 (+) | 303 | WP_071478895.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACLV7Z_RS01190 (SMIG22_02330) | comGF/cglF | 225274..225735 (+) | 462 | WP_218774873.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACLV7Z_RS01195 (SMIG22_02340) | comGG/cglG | 225713..226126 (+) | 414 | WP_218774874.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACLV7Z_RS01200 (SMIG22_02350) | - | 226159..226746 (+) | 588 | WP_218774875.1 | class I SAM-dependent methyltransferase | - |
| ACLV7Z_RS01205 (SMIG22_02360) | comYH | 226807..227760 (+) | 954 | WP_218774876.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACLV7Z_RS01210 (SMIG22_02370) | - | 227810..229000 (+) | 1191 | WP_173306883.1 | acetate kinase | - |
| ACLV7Z_RS01215 (SMIG22_02380) | rnpA | 229148..229519 (+) | 372 | WP_000739243.1 | ribonuclease P protein component | - |
| ACLV7Z_RS01220 (SMIG22_02390) | - | 229494..230318 (+) | 825 | WP_218774877.1 | membrane protein insertase YidC | - |
| ACLV7Z_RS01225 (SMIG22_02400) | jag | 230339..231325 (+) | 987 | WP_218774878.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| ACLV7Z_RS01230 (SMIG22_02410) | - | 231376..231999 (+) | 624 | WP_218774879.1 | ribonuclease P | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35729.96 Da Isoelectric Point: 4.2748
>NTDB_id=1170174 ACLV7Z_RS01205 WP_218774876.1 226807..227760(+) (comYH) [Streptococcus mitis isolate S. mitis G22]
MNFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELEQVKENNQTLKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLDKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVALRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKGWLKEEASLVAMISLPENLFANAKQSKTIFILQKKSEIAVEPFVYPLTSLQDASVLMKFKENFQKWTQGTEI
MNFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELEQVKENNQTLKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLDKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVALRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKGWLKEEASLVAMISLPENLFANAKQSKTIFILQKKSEIAVEPFVYPLTSLQDASVLMKFKENFQKWTQGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=1170174 ACLV7Z_RS01205 WP_218774876.1 226807..227760(+) (comYH) [Streptococcus mitis isolate S. mitis G22]
ATGAATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATTCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCCTGGTGGAGCAAAACAGCATCTATCTGGATGGAGAAACTGAGCTAGAGCAGGTCAAAGAGAACAATC
AGACCCTTAAACGTTTAGCGCTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCCTACAGGCTAATCACCAGTTTACACCGGATGCTATTGCCTTACTTTTGGTGTTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATCACTATTCTCGAAATGGGTTCTGGCATGGGAATTTTGGGCGCTACTTTCTTGACCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATTTGGCAGCTAGCATGGCAGATGTAATTGGTTTACAG
GCTGGCTTTGTCCAAGGGGATGCCGTTCGTCCACAGATGCTCAAAGAAAGCGACGTGGTCATCAGCGACTTGCCTGTCGG
CTATTATCCTGATGATGCCGTTGCGTTGCGTCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGACTTAAGTATCTCAAGTCAGATGGATACGCTATTTTTCTCGCTCCGAGTGATTTGTTGACCAGCCCTCAA
AGTGACTTGTTGAAAGGCTGGTTGAAAGAGGAGGCAAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCCAA
TGCCAAACAATCTAAGACTATTTTTATCCTACAGAAGAAAAGTGAAATAGCAGTAGAACCCTTTGTTTATCCACTTACTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
ATGAATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATTCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCCTGGTGGAGCAAAACAGCATCTATCTGGATGGAGAAACTGAGCTAGAGCAGGTCAAAGAGAACAATC
AGACCCTTAAACGTTTAGCGCTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCCTACAGGCTAATCACCAGTTTACACCGGATGCTATTGCCTTACTTTTGGTGTTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATCACTATTCTCGAAATGGGTTCTGGCATGGGAATTTTGGGCGCTACTTTCTTGACCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATTTGGCAGCTAGCATGGCAGATGTAATTGGTTTACAG
GCTGGCTTTGTCCAAGGGGATGCCGTTCGTCCACAGATGCTCAAAGAAAGCGACGTGGTCATCAGCGACTTGCCTGTCGG
CTATTATCCTGATGATGCCGTTGCGTTGCGTCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGACTTAAGTATCTCAAGTCAGATGGATACGCTATTTTTCTCGCTCCGAGTGATTTGTTGACCAGCCCTCAA
AGTGACTTGTTGAAAGGCTGGTTGAAAGAGGAGGCAAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCCAA
TGCCAAACAATCTAAGACTATTTTTATCCTACAGAAGAAAAGTGAAATAGCAGTAGAACCCTTTGTTTATCCACTTACTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
55.272 |
98.738 |
0.546 |
| comYH | Streptococcus mutans UA159 |
54.952 |
98.738 |
0.543 |