Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ACLV7H_RS09940 Genome accession   NZ_OZ217340
Coordinates   1950660..1951418 (+) Length   252 a.a.
NCBI ID   WP_411867060.1    Uniprot ID   -
Organism   Streptococcus oralis isolate S. oralis A22     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1945660..1956418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS09910 (SORA22_19970) comE 1946247..1946999 (-) 753 WP_045592607.1 competence system response regulator transcription factor ComE Regulator
  ACLV7H_RS09915 (SORA22_19980) comD 1946996..1948315 (-) 1320 Protein_1906 competence system sensor histidine kinase ComD -
  ACLV7H_RS09920 (SORA22_19990) comC/comC2 1948336..1948461 (-) 126 WP_000799678.1 competence-stimulating peptide ComC Regulator
  ACLV7H_RS09930 (SORA22_20010) rlmH 1948743..1949222 (-) 480 WP_411867058.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACLV7H_RS09935 (SORA22_20020) htrA 1949409..1950602 (+) 1194 WP_411867059.1 S1C family serine protease Regulator
  ACLV7H_RS09940 (SORA22_20030) spo0J 1950660..1951418 (+) 759 WP_411867060.1 ParB/RepB/Spo0J family partition protein Regulator
  ACLV7H_RS09945 - 1951635..1952063 (+) 429 Protein_1911 hypothetical protein -

Sequence


Protein


Download         Length: 252 a.a.        Molecular weight: 29122.69 Da        Isoelectric Point: 8.9930

>NTDB_id=1169996 ACLV7H_RS09940 WP_411867060.1 1950660..1951418(+) (spo0J) [Streptococcus oralis isolate S. oralis A22]
MEKFEMISISEIQKNPYQPRKEFDVEKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLADLTSIPAVVKH
LSDQEMMIQSIIENLQRENLNPVEEARAYESLVEKGFTHTEIADKMGKSRPYITNFIRLLSLPEYILAEVENGKISQAHA
RSLVGLDKKQQEYFFQLIKNEDISVRKLEALLTEKKHKKQKKSDSFIKDEEDKLKKILGLSVEIKLSKKDTGKIIISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=1169996 ACLV7H_RS09940 WP_411867060.1 1950660..1951418(+) (spo0J) [Streptococcus oralis isolate S. oralis A22]
ATGGAAAAATTTGAAATGATTTCTATCTCTGAAATACAAAAGAATCCTTACCAACCTCGGAAAGAATTTGATGTAGAAAA
ATTAAAAGAATTAGCTCAGTCAATCAAAGAAAATGGGCTCATCCAACCAATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGATATCGGGCTTCTCTCTTGGCTGATCTGACCTCTATTCCAGCCGTTGTAAAGCAC
CTCTCAGATCAGGAAATGATGATCCAGTCAATCATTGAGAATTTGCAGAGAGAAAATTTAAATCCTGTTGAAGAAGCACG
CGCCTATGAATCTTTAGTAGAAAAAGGATTTACTCACACTGAAATAGCAGATAAAATGGGGAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTACTTTCCCTACCAGAATATATCTTAGCTGAAGTAGAAAATGGAAAAATTTCTCAAGCGCATGCA
CGTTCACTAGTTGGTTTGGATAAAAAGCAGCAAGAATATTTCTTCCAACTAATCAAAAATGAAGATATTTCTGTGAGAAA
GTTAGAAGCACTTCTTACAGAGAAAAAACACAAGAAGCAGAAAAAAAGTGATTCTTTCATCAAAGATGAAGAAGATAAAT
TAAAAAAAATACTCGGTTTAAGTGTAGAAATTAAACTTTCAAAAAAAGATACTGGAAAGATTATTATCTCTTTTTCAAGT
CAAGAAGAATATGACAGAATTATCAACAGCCTTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

49.802

100

0.5


Multiple sequence alignment