Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   ACLV7H_RS08705 Genome accession   NZ_OZ217340
Coordinates   1705824..1706447 (-) Length   207 a.a.
NCBI ID   WP_045593016.1    Uniprot ID   A0A0F2D002
Organism   Streptococcus oralis isolate S. oralis A22     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1700824..1711447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS08675 (SORA22_17460) - 1700842..1701036 (-) 195 WP_000415531.1 PspC domain-containing protein -
  ACLV7H_RS08680 (SORA22_17470) recA 1701206..1702357 (-) 1152 WP_411866943.1 recombinase RecA Machinery gene
  ACLV7H_RS08685 (SORA22_17480) cinA 1702412..1703668 (-) 1257 WP_411866944.1 competence/damage-inducible protein A Machinery gene
  ACLV7H_RS08690 (SORA22_17490) brpA 1703741..1704781 (-) 1041 WP_411866945.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACLV7H_RS08695 (SORA22_17500) - 1704786..1705307 (-) 522 WP_411866946.1 N-acetyltransferase family protein -
  ACLV7H_RS08700 (SORA22_17510) tsaE 1705297..1705740 (-) 444 WP_411866947.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACLV7H_RS08705 (SORA22_17520) comM 1705824..1706447 (-) 624 WP_045593016.1 hypothetical protein Regulator
  ACLV7H_RS08710 (SORA22_17530) ndk 1706582..1707001 (-) 420 WP_411867081.1 nucleoside-diphosphate kinase -
  ACLV7H_RS08715 (SORA22_17540) rpoC 1707110..1710775 (-) 3666 WP_411866948.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23642.56 Da        Isoelectric Point: 9.4832

>NTDB_id=1169984 ACLV7H_RS08705 WP_045593016.1 1705824..1706447(-) (comM) [Streptococcus oralis isolate S. oralis A22]
MVKSIRLLLLIAVIQISFSSCLLWKESFLSLKQTNAYFLIFIVGISVLCAGVNYFHTADQSRHSILHVQKKVGLIYGLLL
VVNLLATCLVLSESIQTTSKLQQELVDLFLPSFFFLLGVDLLIFLPFDKIFRDIENHLNKKKTVVISVLATMVFLRNPLV
ISSILLYISVGFLCARFLFPKCIQREISFYGHLIRDILFVFSIVVFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=1169984 ACLV7H_RS08705 WP_045593016.1 1705824..1706447(-) (comM) [Streptococcus oralis isolate S. oralis A22]
ATGGTAAAATCAATTCGCCTATTGTTACTGATTGCAGTCATCCAGATTAGTTTTAGTAGTTGTCTATTGTGGAAAGAATC
CTTTTTATCTTTAAAACAGACCAATGCTTATTTTTTGATTTTTATAGTAGGAATTTCTGTTTTGTGTGCTGGGGTAAATT
ATTTCCATACAGCAGACCAGTCCAGGCACAGTATTTTGCATGTTCAAAAGAAAGTGGGTCTTATTTATGGCCTCCTTTTG
GTAGTCAATCTTCTGGCAACCTGCCTGGTTCTCTCAGAAAGCATCCAAACCACTAGCAAATTGCAGCAGGAATTGGTTGA
CCTCTTTTTACCCTCCTTCTTTTTCTTGCTAGGAGTAGACCTATTGATTTTCTTACCTTTTGATAAAATTTTTCGCGATA
TAGAAAATCACCTAAATAAAAAGAAAACAGTCGTCATTTCCGTTCTAGCTACGATGGTTTTCTTGAGGAATCCCTTAGTG
ATTTCCTCGATCCTCCTTTATATCAGTGTCGGTTTTCTATGCGCACGTTTCCTTTTTCCAAAATGTATCCAAAGAGAAAT
CTCCTTTTACGGCCACCTGATTCGGGATATCCTGTTTGTTTTTTCAATAGTTGTATTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0F2D002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

51.942

99.517

0.517
  comM Streptococcus pneumoniae R6

51.942

99.517

0.517
  comM Streptococcus pneumoniae TIGR4

51.942

99.517

0.517
  comM Streptococcus mitis NCTC 12261

40.609

95.169

0.386
  comM Streptococcus mitis SK321

40.102

95.169

0.382

Multiple sequence alignment