Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACFCTL_RS02105 | Genome accession | NZ_OZ182546 |
| Coordinates | 453782..454261 (-) | Length | 159 a.a. |
| NCBI ID | WP_011945554.1 | Uniprot ID | A0A378K2W0 |
| Organism | Legionella pneumophila isolate ZIB8567 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 448782..459261
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFCTL_RS02065 | rplO | 448914..449348 (+) | 435 | WP_010946097.1 | 50S ribosomal protein L15 | - |
| ACFCTL_RS02070 | secY | 449351..450679 (+) | 1329 | WP_011945551.1 | preprotein translocase subunit SecY | - |
| ACFCTL_RS02075 | rpmJ | 450696..450809 (+) | 114 | WP_010946099.1 | 50S ribosomal protein L36 | - |
| ACFCTL_RS02080 | rpsM | 450887..451243 (+) | 357 | WP_010946100.1 | 30S ribosomal protein S13 | - |
| ACFCTL_RS02085 | rpsK | 451267..451665 (+) | 399 | WP_010946101.1 | 30S ribosomal protein S11 | - |
| ACFCTL_RS02090 | rpsD | 451682..452302 (+) | 621 | WP_010946102.1 | 30S ribosomal protein S4 | - |
| ACFCTL_RS02095 | - | 452321..453313 (+) | 993 | WP_011945553.1 | DNA-directed RNA polymerase subunit alpha | - |
| ACFCTL_RS02100 | rplQ | 453332..453715 (+) | 384 | WP_010946104.1 | 50S ribosomal protein L17 | - |
| ACFCTL_RS02105 | ssb | 453782..454261 (-) | 480 | WP_011945554.1 | single-stranded DNA-binding protein | Machinery gene |
| ACFCTL_RS02110 | - | 454345..455712 (-) | 1368 | WP_011945555.1 | MFS transporter | - |
| ACFCTL_RS02115 | fabL | 455874..456632 (+) | 759 | WP_011945556.1 | enoyl-[acyl-carrier-protein] reductase FabL | - |
| ACFCTL_RS02120 | - | 456703..457116 (+) | 414 | WP_010946108.1 | acyl carrier protein | - |
| ACFCTL_RS02125 | - | 457116..458012 (+) | 897 | WP_011945557.1 | hydroxymyristoyl-ACP dehydratase | - |
Sequence
Protein
Download Length: 159 a.a. Molecular weight: 17640.40 Da Isoelectric Point: 4.6616
>NTDB_id=1167968 ACFCTL_RS02105 WP_011945554.1 453782..454261(-) (ssb) [Legionella pneumophila isolate ZIB8567]
MARGINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTEWHRVVCFNRLGEIAGEYIRKGSKLYVE
GSLRTRKWQDQQGQDRYTTEIVASDIQMLDSKGNGATNYDDMPSFQGTSTPQQASTKNQATPTSTAQDAFDELDDDIPF
MARGINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTEWHRVVCFNRLGEIAGEYIRKGSKLYVE
GSLRTRKWQDQQGQDRYTTEIVASDIQMLDSKGNGATNYDDMPSFQGTSTPQQASTKNQATPTSTAQDAFDELDDDIPF
Nucleotide
Download Length: 480 bp
>NTDB_id=1167968 ACFCTL_RS02105 WP_011945554.1 453782..454261(-) (ssb) [Legionella pneumophila isolate ZIB8567]
ATGGCAAGAGGAATAAATAAAGTAATACTTGTTGGTAATGTAGGGGCAGATCCTGATGTAAGGTATTTGCCTAACGGAAA
TGCTGTTACTACACTTTCAGTTGCTACCAGTGAAACATGGAAAGACAAAACGACAGGTGAAAAACAAGATAGAACTGAAT
GGCACAGAGTTGTCTGTTTTAATCGTCTGGGTGAAATAGCTGGAGAATACATTCGCAAAGGTTCCAAGCTATATGTCGAA
GGGAGTTTAAGAACAAGAAAATGGCAAGATCAACAGGGCCAAGATAGATATACAACTGAAATTGTTGCGTCTGACATTCA
AATGCTCGATAGCAAAGGAAATGGTGCCACTAATTACGATGACATGCCTTCATTTCAGGGAACCTCTACCCCTCAACAAG
CTTCAACAAAAAATCAAGCAACACCAACATCTACTGCACAAGATGCTTTTGATGAATTAGATGATGACATACCGTTTTAA
ATGGCAAGAGGAATAAATAAAGTAATACTTGTTGGTAATGTAGGGGCAGATCCTGATGTAAGGTATTTGCCTAACGGAAA
TGCTGTTACTACACTTTCAGTTGCTACCAGTGAAACATGGAAAGACAAAACGACAGGTGAAAAACAAGATAGAACTGAAT
GGCACAGAGTTGTCTGTTTTAATCGTCTGGGTGAAATAGCTGGAGAATACATTCGCAAAGGTTCCAAGCTATATGTCGAA
GGGAGTTTAAGAACAAGAAAATGGCAAGATCAACAGGGCCAAGATAGATATACAACTGAAATTGTTGCGTCTGACATTCA
AATGCTCGATAGCAAAGGAAATGGTGCCACTAATTACGATGACATGCCTTCATTTCAGGGAACCTCTACCCCTCAACAAG
CTTCAACAAAAAATCAAGCAACACCAACATCTACTGCACAAGATGCTTTTGATGAATTAGATGATGACATACCGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
52.247 |
100 |
0.585 |
| ssb | Vibrio cholerae strain A1552 |
49.143 |
100 |
0.541 |
| ssb | Neisseria gonorrhoeae MS11 |
39.655 |
100 |
0.434 |
| ssb | Neisseria meningitidis MC58 |
39.655 |
100 |
0.434 |