Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AU14_RS15215 Genome accession   NZ_CP007151
Coordinates   3292422..3292814 (-) Length   130 a.a.
NCBI ID   WP_041342172.1    Uniprot ID   -
Organism   Marinobacter similis strain A3d10     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3287422..3297814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AU14_RS15195 (AU14_15740) - 3288368..3289266 (-) 899 Protein_3338 CheR family methyltransferase -
  AU14_RS15200 (AU14_15745) - 3289294..3291369 (-) 2076 WP_041342162.1 methyl-accepting chemotaxis protein -
  AU14_RS15205 (AU14_15750) - 3291461..3292006 (-) 546 WP_041342164.1 chemotaxis protein CheW -
  AU14_RS15210 (AU14_15755) pilH 3292027..3292389 (-) 363 WP_041342169.1 twitching motility response regulator PilH -
  AU14_RS15215 (AU14_15760) pilG 3292422..3292814 (-) 393 WP_041342172.1 twitching motility response regulator PilG Regulator
  AU14_RS15220 (AU14_15765) gshB 3293109..3294071 (+) 963 WP_094191234.1 glutathione synthase -
  AU14_RS15225 (AU14_15770) - 3294110..3294976 (+) 867 WP_041342178.1 energy transducer TonB -
  AU14_RS15230 (AU14_15775) - 3294973..3295539 (+) 567 WP_041342181.1 YqgE/AlgH family protein -
  AU14_RS15235 (AU14_15780) ruvX 3295532..3295975 (+) 444 WP_041342184.1 Holliday junction resolvase RuvX -
  AU14_RS15240 (AU14_15785) pyrR 3296008..3296517 (+) 510 WP_041342187.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AU14_RS15245 (AU14_15790) - 3296577..3297589 (+) 1013 Protein_3348 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14551.85 Da        Isoelectric Point: 6.3282

>NTDB_id=116547 AU14_RS15215 WP_041342172.1 3292422..3292814(-) (pilG) [Marinobacter similis strain A3d10]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYIPQAAQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=116547 AU14_RS15215 WP_041342172.1 3292422..3292814(-) (pilG) [Marinobacter similis strain A3d10]
ATGGATGACAACTTCGAGAATTTGAAGATCATGGTGATCGACGACAGCAAAACCATTCGTCGCACCGCAGAAACCCTTCT
GAAAAAAGTCGGCTGTGAGGTAATCACCGCGACTGACGGCTTTGACGCTCTGGCCAAGATTGCCGATTCCCAGCCGGACA
TCATCTTTGTCGATATCATGATGCCGCGACTGGATGGCTACCAGACCTGCGCACTCATCAAGAACAATTCCTCCTTCAAA
AAGACGCCGGTTATTATGCTCTCCAGCAAGGACGGCCTGTTCGACAAGGCGAAGGGCCGCATCGTCGGCTCTGACCAATA
CCTGACCAAACCGTTCAGCAAGGACGAGCTGCTCAATACTATCCGCCAATACATTCCCCAGGCGGCACAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.6

96.154

0.746
  vicR Streptococcus mutans UA159

42.735

90

0.385
  micA Streptococcus pneumoniae Cp1015

44.037

83.846

0.369
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362

Multiple sequence alignment