Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ABNR90_RS03975 | Genome accession | NZ_OZ021673 |
| Coordinates | 749700..750311 (-) | Length | 203 a.a. |
| NCBI ID | WP_050169631.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae isolate SGC-23-002 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 696846..760760 | 749700..750311 | within | 0 |
Gene organization within MGE regions
Location: 696846..760760
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABNR90_RS03605 | - | 697894..698199 (-) | 306 | WP_047953262.1 | hypothetical protein | - |
| ABNR90_RS03610 | purM | 698417..699451 (-) | 1035 | WP_003691398.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
| ABNR90_RS03615 | - | 700140..701129 (+) | 990 | WP_003689040.1 | site-specific integrase | - |
| ABNR90_RS03620 | - | 701471..701950 (+) | 480 | WP_002241413.1 | DUF4760 domain-containing protein | - |
| ABNR90_RS03625 | - | 702010..705057 (-) | 3048 | WP_252295680.1 | tape measure protein | - |
| ABNR90_RS03630 | - | 705551..705724 (-) | 174 | WP_164823238.1 | hypothetical protein | - |
| ABNR90_RS03635 | - | 705708..706052 (-) | 345 | WP_003695464.1 | hypothetical protein | - |
| ABNR90_RS03640 | - | 706053..706592 (-) | 540 | WP_050163081.1 | TIGR02594 family protein | - |
| ABNR90_RS03645 | - | 706634..706759 (-) | 126 | WP_255294325.1 | hypothetical protein | - |
| ABNR90_RS03650 | - | 706799..707035 (+) | 237 | WP_003689049.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| ABNR90_RS03655 | - | 707035..707382 (+) | 348 | WP_003689051.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| ABNR90_RS03660 | - | 707750..708082 (-) | 333 | WP_003691408.1 | hypothetical protein | - |
| ABNR90_RS03665 | - | 708083..708553 (-) | 471 | WP_003691410.1 | hypothetical protein | - |
| ABNR90_RS03670 | - | 708624..708929 (-) | 306 | WP_003689058.1 | hypothetical protein | - |
| ABNR90_RS03675 | - | 709041..713186 (-) | 4146 | WP_252295678.1 | phage tail protein | - |
| ABNR90_RS03680 | - | 713426..713704 (+) | 279 | WP_003689062.1 | helix-turn-helix domain-containing protein | - |
| ABNR90_RS03685 | - | 713732..714163 (-) | 432 | WP_003689064.1 | NlpC/P60 family protein | - |
| ABNR90_RS03690 | - | 714165..715019 (-) | 855 | WP_003698614.1 | DUF2163 domain-containing protein | - |
| ABNR90_RS03695 | - | 715016..715615 (-) | 600 | WP_003692874.1 | DUF2460 domain-containing protein | - |
| ABNR90_RS03700 | - | 715615..715881 (-) | 267 | WP_003689070.1 | hypothetical protein | - |
| ABNR90_RS03705 | - | 715893..716222 (-) | 330 | WP_003692871.1 | hypothetical protein | - |
| ABNR90_RS03710 | - | 716283..717056 (-) | 774 | WP_003691416.1 | hypothetical protein | - |
| ABNR90_RS03715 | - | 717082..717510 (-) | 429 | WP_003689076.1 | hypothetical protein | - |
| ABNR90_RS03720 | - | 717507..717989 (-) | 483 | WP_003703855.1 | HK97 gp10 family phage protein | - |
| ABNR90_RS03725 | - | 717989..718519 (-) | 531 | WP_003689080.1 | head-tail connector protein | - |
| ABNR90_RS03730 | - | 718522..718914 (-) | 393 | WP_123771580.1 | hypothetical protein | - |
| ABNR90_RS03735 | - | 718921..720420 (-) | 1500 | WP_003689084.1 | hypothetical protein | - |
| ABNR90_RS03740 | - | 720462..721619 (-) | 1158 | WP_010360058.1 | HK97 family phage prohead protease | - |
| ABNR90_RS03745 | - | 721687..723834 (-) | 2148 | WP_003691423.1 | phage portal protein | - |
| ABNR90_RS03750 | terL | 723831..725252 (-) | 1422 | WP_003697216.1 | phage terminase large subunit | - |
| ABNR90_RS03755 | - | 725314..725763 (-) | 450 | WP_003695485.1 | hypothetical protein | - |
| ABNR90_RS03760 | - | 726056..726925 (-) | 870 | WP_033910830.1 | BRO family protein | - |
| ABNR90_RS03765 | - | 727207..728166 (-) | 960 | WP_123768253.1 | hypothetical protein | - |
| ABNR90_RS03770 | - | 728227..728634 (-) | 408 | WP_047922557.1 | hypothetical protein | - |
| ABNR90_RS03775 | - | 728756..728884 (+) | 129 | WP_256263200.1 | hypothetical protein | - |
| ABNR90_RS03780 | - | 728901..729281 (-) | 381 | WP_033910829.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ABNR90_RS03785 | - | 729272..729553 (-) | 282 | WP_003689109.1 | hypothetical protein | - |
| ABNR90_RS03790 | - | 729582..729731 (-) | 150 | WP_003689110.1 | hypothetical protein | - |
| ABNR90_RS03795 | - | 729908..730402 (-) | 495 | WP_041421248.1 | DUF3310 domain-containing protein | - |
| ABNR90_RS03800 | - | 730441..730647 (-) | 207 | WP_184982621.1 | hypothetical protein | - |
| ABNR90_RS03805 | - | 730717..731499 (-) | 783 | WP_025456432.1 | ATP-binding protein | - |
| ABNR90_RS03810 | - | 731514..732524 (-) | 1011 | WP_218422915.1 | helix-turn-helix domain-containing protein | - |
| ABNR90_RS03815 | - | 732521..732748 (-) | 228 | WP_003691442.1 | helix-turn-helix domain-containing protein | - |
| ABNR90_RS03820 | - | 732922..733110 (+) | 189 | WP_047926773.1 | hypothetical protein | - |
| ABNR90_RS03825 | - | 733087..733242 (-) | 156 | WP_047923772.1 | hypothetical protein | - |
| ABNR90_RS03830 | - | 733322..733558 (-) | 237 | WP_003687971.1 | Cro/CI family transcriptional regulator | - |
| ABNR90_RS03835 | - | 733681..734343 (+) | 663 | WP_012503489.1 | LexA family transcriptional regulator | - |
| ABNR90_RS03840 | - | 734458..734895 (+) | 438 | WP_003687967.1 | hypothetical protein | - |
| ABNR90_RS03845 | - | 734912..735373 (+) | 462 | WP_003687965.1 | helix-turn-helix domain-containing protein | - |
| ABNR90_RS03850 | - | 735370..735783 (+) | 414 | WP_003687963.1 | hypothetical protein | - |
| ABNR90_RS03855 | - | 735981..736181 (+) | 201 | WP_047917349.1 | hypothetical protein | - |
| ABNR90_RS03860 | - | 736214..736690 (+) | 477 | WP_012504141.1 | DUF6948 domain-containing protein | - |
| ABNR90_RS03865 | - | 736687..736974 (+) | 288 | WP_252295574.1 | hypothetical protein | - |
| ABNR90_RS03870 | - | 737115..737447 (+) | 333 | WP_003687946.1 | hypothetical protein | - |
| ABNR90_RS03875 | - | 737600..737878 (+) | 279 | WP_041421244.1 | NGO1622 family putative holin | - |
| ABNR90_RS03880 | - | 737875..738036 (+) | 162 | WP_003691530.1 | hypothetical protein | - |
| ABNR90_RS03885 | - | 738105..738791 (+) | 687 | WP_033910330.1 | phage replication initiation protein, NGO0469 family | - |
| ABNR90_RS03890 | - | 738931..739113 (+) | 183 | WP_003691535.1 | hypothetical protein | - |
| ABNR90_RS03895 | - | 739110..739601 (+) | 492 | WP_017147227.1 | siphovirus Gp157 family protein | - |
| ABNR90_RS03900 | - | 739653..739868 (+) | 216 | WP_003691538.1 | hypothetical protein | - |
| ABNR90_RS03905 | - | 739979..740212 (+) | 234 | Protein_767 | hypothetical protein | - |
| ABNR90_RS03910 | - | 740526..741209 (+) | 684 | WP_003687929.1 | DUF2786 domain-containing protein | - |
| ABNR90_RS03915 | - | 741404..741673 (+) | 270 | WP_003687928.1 | hypothetical protein | - |
| ABNR90_RS03920 | - | 742029..743225 (-) | 1197 | WP_017147117.1 | integrase arm-type DNA-binding domain-containing protein | - |
| ABNR90_RS03935 | yaaA | 743756..744535 (-) | 780 | WP_003690913.1 | peroxide stress protein YaaA | - |
| ABNR90_RS03940 | dapC | 744691..745878 (-) | 1188 | WP_003690911.1 | succinyldiaminopimelate transaminase | - |
| ABNR90_RS03945 | dut | 745956..746408 (-) | 453 | WP_003702446.1 | dUTP diphosphatase | - |
| ABNR90_RS03950 | - | 746574..747283 (+) | 710 | Protein_774 | AzlC family ABC transporter permease | - |
| ABNR90_RS03955 | - | 747280..747588 (+) | 309 | WP_003706588.1 | AzlD family protein | - |
| ABNR90_RS03960 | pilL | 747658..748131 (-) | 474 | WP_025455870.1 | PilX family type IV pilin | Machinery gene |
| ABNR90_RS03965 | pilK | 748133..748744 (-) | 612 | WP_003687918.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ABNR90_RS03970 | pilJ | 748723..749703 (-) | 981 | WP_010951046.1 | PilW family protein | Machinery gene |
| ABNR90_RS03975 | pilV | 749700..750311 (-) | 612 | WP_050169631.1 | type IV pilus modification protein PilV | Machinery gene |
| ABNR90_RS03980 | pilH | 750343..751008 (-) | 666 | WP_047918678.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ABNR90_RS03985 | dnaB | 751163..752569 (-) | 1407 | WP_047917169.1 | replicative DNA helicase | - |
| ABNR90_RS03990 | - | 752733..753314 (+) | 582 | WP_003698180.1 | superoxide dismutase | - |
| ABNR90_RS03995 | - | 753546..754055 (-) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| ABNR90_RS04000 | - | 754382..754714 (-) | 333 | WP_003687908.1 | hypothetical protein | - |
| ABNR90_RS04005 | cysT | 754900..755738 (+) | 839 | Protein_785 | sulfate ABC transporter permease subunit CysT | - |
| ABNR90_RS04010 | cysW | 755927..756787 (+) | 861 | WP_252295676.1 | sulfate ABC transporter permease subunit CysW | - |
| ABNR90_RS04015 | - | 756784..757860 (+) | 1077 | WP_003687905.1 | sulfate/molybdate ABC transporter ATP-binding protein | - |
| ABNR90_RS04020 | ilvA | 757916..759442 (-) | 1527 | WP_003694966.1 | threonine ammonia-lyase, biosynthetic | - |
| ABNR90_RS04025 | - | 759591..760760 (+) | 1170 | WP_003690889.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
Sequence
Protein
Download Length: 203 a.a. Molecular weight: 22076.13 Da Isoelectric Point: 4.8546
>NTDB_id=1162859 ABNR90_RS03975 WP_050169631.1 749700..750311(-) (pilV) [Neisseria gonorrhoeae isolate SGC-23-002]
MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDLDSNKKN
YSLYMGKQTLSAVDGKFMLDAEKSKAQLAEEQLKRFSHELKNALPDAVAIHYAVCKDSSGDAPTLSDSGAFSSNCDNKAN
GDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE
MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDLDSNKKN
YSLYMGKQTLSAVDGKFMLDAEKSKAQLAEEQLKRFSHELKNALPDAVAIHYAVCKDSSGDAPTLSDSGAFSSNCDNKAN
GDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE
Nucleotide
Download Length: 612 bp
>NTDB_id=1162859 ABNR90_RS03975 WP_050169631.1 749700..750311(-) (pilV) [Neisseria gonorrhoeae isolate SGC-23-002]
ATGAAGAATAATGATTGCTTGCGCCTGAAAAATCCCCAGTCCGGTATGGCGTTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCATTGCTGTCCGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAAACGCAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTTGGACAGCAACAAGAAAAAC
TATAGTCTTTACATGGGAAAACAGACACTATCAGCTGTGGATGGTAAGTTTATGCTTGATGCCGAGAAAAGTAAGGCGCA
GTTGGCAGAGGAACAATTGAAGAGATTTAGTCATGAGCTGAAAAATGCCTTGCCGGATGCGGTAGCTATTCATTACGCCG
TCTGCAAGGATTCGTCGGGTGACGCGCCGACATTGTCCGACAGCGGTGCTTTTTCTTCAAATTGCGACAATAAGGCAAAC
GGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCTTGAAGTGAG
CGGCGACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGTGAATGA
ATGAAGAATAATGATTGCTTGCGCCTGAAAAATCCCCAGTCCGGTATGGCGTTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCATTGCTGTCCGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAAACGCAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTTGGACAGCAACAAGAAAAAC
TATAGTCTTTACATGGGAAAACAGACACTATCAGCTGTGGATGGTAAGTTTATGCTTGATGCCGAGAAAAGTAAGGCGCA
GTTGGCAGAGGAACAATTGAAGAGATTTAGTCATGAGCTGAAAAATGCCTTGCCGGATGCGGTAGCTATTCATTACGCCG
TCTGCAAGGATTCGTCGGGTGACGCGCCGACATTGTCCGACAGCGGTGCTTTTTCTTCAAATTGCGACAATAAGGCAAAC
GGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCTTGAAGTGAG
CGGCGACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGTGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Neisseria meningitidis 8013 |
89.372 |
100 |
0.911 |
| pilI | Neisseria gonorrhoeae MS11 |
83.744 |
100 |
0.837 |
| pilV | Neisseria gonorrhoeae MS11 |
83.744 |
100 |
0.837 |