Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   U8955_RS01870 Genome accession   NZ_OY769914
Coordinates   340847..342808 (+) Length   653 a.a.
NCBI ID   WP_068981895.1    Uniprot ID   A0A7T3A0A7
Organism   Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 335847..347808
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U8955_RS01860 (SDENT7746_01890) - 336951..338561 (+) 1611 WP_038804138.1 glycoside hydrolase family 13 protein -
  U8955_RS01865 (SDENT7746_01895) amiA 338730..340697 (+) 1968 WP_038804137.1 peptide ABC transporter substrate-binding protein Regulator
  U8955_RS01870 (SDENT7746_01900) amiA3 340847..342808 (+) 1962 WP_068981895.1 peptide ABC transporter substrate-binding protein Regulator
  U8955_RS01875 (SDENT7746_01905) - 342996..344441 (+) 1446 WP_038804136.1 LCP family protein -
  U8955_RS01880 (SDENT7746_01910) cps4B 344443..345174 (+) 732 WP_038804135.1 capsular polysaccharide biosynthesis protein Cps4B -
  U8955_RS01885 (SDENT7746_01915) cpsC 345183..345875 (+) 693 WP_038804134.1 capsular polysaccharide biosynthesis protein CpsC -
  U8955_RS01890 (SDENT7746_01920) - 345885..346568 (+) 684 WP_038804133.1 tyrosine-protein kinase -

Sequence

Protein


Download         Length: 653 a.a.        Molecular weight: 73250.48 Da        Isoelectric Point: 4.8780

>NTDB_id=1161706 U8955_RS01870 WP_068981895.1 340847..342808(+) (amiA3) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
MIKMKKRLIGTGLVLATGILLSACGQSNTDTSTFSSTFGANPTTFNYLLDYYADNTAVITNLVDGLLENDSYGNLTPALA
EDWSVSADDLTYTYKLRKDAKWYTADGEEYAPVKAQDFVTGIKYAADNKGQAMDLIQNSIKGLNDYVTGVTNDFSTVGVK
ALDDYTVEYTLTRPEPYWNSKTTNSILFPVNEEFLKSKDKDFGTLTPDSILYNGPYLLKDFTSKSSIEYVKNPHYYDHDK
VTIEKVKLAYFDGSDQEMTIRNFESGAYSLAGVYPNSSSYAKTKEKYQDNIVYSLQDKTSWYFNFNVNRKAYNHTAKTSD
QQKNSTQTAILNKNFRQALNFAIDRTAYSAQSNGQEAASNTLRNTLVPPTFVQVGDKSFGEVVSSKLVQYGTEWSEINLS
DAQDGYFNREKAQAKFAEAKKELEAQGVTFPIHLDIPVDQTNKNAVSGMNSLKQTLETVLGSDHVVIDVQQLSTDDFGNV
AFLAPNPAARDYDLNFDGWVGDYQDPSTYLDPFNAEDGFYLKIFGLDAKEDQDKIKSLGLDTYTKLLKEADAENKDVSKR
YEKYAEAQAWMIDNSLVMSAMSNGGTASVTKVTPFTRAYSLVGIKGDGNNYKYMRLQKDPVTKKQFDEAKTKWEEESKKA
IEKSQKEFKNHIK

Nucleotide


Download         Length: 1962 bp        

>NTDB_id=1161706 U8955_RS01870 WP_068981895.1 340847..342808(+) (amiA3) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
ATGATCAAAATGAAAAAAAGACTTATCGGAACTGGTCTAGTCCTAGCTACAGGGATTTTGCTCTCGGCATGTGGACAGTC
CAACACAGATACAAGCACCTTCTCATCAACATTTGGTGCGAATCCGACAACTTTTAACTATCTTCTAGATTATTATGCAG
ATAATACTGCTGTTATTACCAATCTCGTAGATGGTTTGTTAGAGAATGACAGCTATGGCAACCTAACGCCAGCTCTAGCT
GAGGATTGGTCTGTTTCAGCAGATGATTTGACCTATACCTACAAACTCAGAAAAGATGCCAAGTGGTACACAGCCGATGG
AGAAGAGTATGCTCCAGTCAAAGCTCAGGATTTTGTCACTGGGATCAAATATGCCGCTGACAACAAGGGGCAAGCCATGG
ATCTGATCCAAAATTCAATCAAGGGATTGAATGACTATGTGACGGGTGTGACTAATGACTTTTCAACTGTTGGTGTCAAA
GCATTGGATGATTACACAGTCGAGTACACTTTAACTCGACCAGAGCCGTATTGGAATTCAAAAACAACCAATAGTATCCT
TTTCCCAGTCAACGAAGAGTTCTTGAAATCAAAGGATAAAGATTTTGGAACCTTGACACCAGACAGTATCCTTTATAATG
GTCCATATTTGTTAAAAGATTTTACATCAAAATCGTCAATCGAATATGTGAAGAATCCACACTACTATGACCATGATAAA
GTGACCATTGAAAAAGTTAAATTAGCCTATTTTGATGGCTCTGATCAAGAGATGACCATTCGAAACTTTGAAAGTGGTGC
CTATTCACTTGCGGGAGTCTATCCAAATAGCTCGAGCTATGCCAAGACGAAAGAAAAATACCAAGACAATATTGTTTATA
GCTTACAAGACAAGACTTCTTGGTACTTCAACTTTAATGTAAACCGTAAAGCCTATAACCATACTGCTAAAACATCAGAC
CAGCAAAAGAACTCAACGCAAACAGCGATTTTAAATAAAAACTTCCGTCAGGCCTTGAACTTTGCCATCGATCGTACAGC
CTACTCTGCCCAATCTAACGGGCAAGAAGCAGCAAGTAATACCCTTCGTAATACCCTTGTTCCCCCTACATTTGTGCAAG
TGGGAGATAAGAGCTTTGGGGAAGTGGTCTCTTCTAAACTTGTTCAGTATGGAACAGAATGGTCAGAAATCAACTTGTCG
GATGCCCAAGACGGTTACTTTAACAGGGAAAAGGCTCAAGCAAAATTTGCGGAAGCTAAAAAGGAATTGGAAGCCCAAGG
GGTGACCTTCCCCATTCATTTGGACATCCCGGTTGATCAAACCAATAAAAATGCAGTTTCTGGTATGAATTCACTTAAAC
AGACACTTGAAACAGTACTAGGTTCTGATCATGTCGTCATTGATGTTCAGCAACTTTCAACGGATGACTTTGGGAATGTC
GCTTTCCTAGCTCCAAATCCAGCAGCTCGTGATTACGATTTGAACTTTGATGGCTGGGTTGGTGATTACCAAGATCCGTC
AACTTATCTGGATCCATTTAATGCAGAAGATGGCTTCTATCTCAAGATTTTCGGTTTAGATGCTAAGGAAGATCAGGATA
AAATTAAGAGTTTGGGATTGGATACCTATACGAAACTTCTAAAAGAAGCAGATGCTGAGAATAAAGACGTTTCTAAACGT
TATGAAAAATACGCTGAAGCTCAAGCTTGGATGATTGACAATTCTCTAGTCATGTCTGCTATGTCAAATGGTGGTACGGC
CTCTGTAACCAAAGTAACTCCATTTACACGTGCCTACTCTCTAGTGGGAATCAAAGGTGATGGAAATAACTACAAGTATA
TGAGACTGCAAAAAGATCCTGTTACCAAGAAACAATTTGATGAAGCCAAGACTAAGTGGGAAGAAGAGAGTAAAAAGGCT
ATCGAAAAGAGCCAAAAAGAATTTAAAAATCATATCAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(75-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T3A0A7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

50.381

100

0.507
  amiA3 Streptococcus thermophilus LMG 18311

50.228

100

0.505
  amiA Streptococcus salivarius strain HSISS4

50

100

0.502

Multiple sequence alignment