Detailed information NTG1160161

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QPK16_RS06120
• Genome accession: NZ_OX638610
• Coordinates: 1310481..1311545 (+)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain 3541 isolate 3541
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1305481..1316545

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QPK16_RS06110 (JCHGIK_07420)	-	1306461..1307729 (+)	1269	WP_003095842.1	malic enzyme	-
QPK16_RS06115 (JCHGIK_07425)	-	1307825..1310296 (-)	2472	WP_043096086.1	penicillin-binding protein 1A	-
QPK16_RS06120 (JCHGIK_07435)	pilM	1310481..1311545 (+)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
QPK16_RS06125 (JCHGIK_07440)	pilN	1311545..1312141 (+)	597	WP_003095839.1	type 4a pilus biogenesis protein PilN	-
QPK16_RS06130 (JCHGIK_07445)	pilO	1312138..1312761 (+)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	-
QPK16_RS06135 (JCHGIK_07450)	pilP	1312758..1313282 (+)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
QPK16_RS06140 (JCHGIK_07455)	pilQ	1313336..1315480 (+)	2145	WP_003146401.1	type 4a pilus secretin PilQ	Machinery gene
QPK16_RS06145 (JCHGIK_07460)	aroK	1315492..1316010 (+)	519	WP_003095833.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=1160161 QPK16_RS06120 WP_003110888.1 1310481..1311545(+) (pilM) [Pseudomonas aeruginosa strain 3541 isolate 3541]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1160161 QPK16_RS06120 WP_003110888.1 1310481..1311545(+) (pilM) [Pseudomonas aeruginosa strain 3541 isolate 3541]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGACTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGGCTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGCCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466