Detailed information NTG1160146

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QRQ54_RS29755
• Genome accession: NZ_OX638564
• Coordinates: 6399379..6400443 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain 3796A isolate 3796A
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6394379..6405443

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRQ54_RS29730 (PAE3796A_29600)	aroK	6394914..6395432 (-)	519	WP_003095833.1	shikimate kinase AroK	-
QRQ54_RS29735 (PAE3796A_29605)	pilQ	6395444..6397588 (-)	2145	WP_003146401.1	type 4a pilus secretin PilQ	Machinery gene
QRQ54_RS29740 (PAE3796A_29610)	pilP	6397642..6398166 (-)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
QRQ54_RS29745 (PAE3796A_29615)	pilO	6398163..6398786 (-)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	-
QRQ54_RS29750 (PAE3796A_29620)	pilN	6398783..6399379 (-)	597	WP_003095839.1	type 4a pilus biogenesis protein PilN	-
QRQ54_RS29755 (PAE3796A_29625)	pilM	6399379..6400443 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
QRQ54_RS29760 (PAE3796A_29635)	-	6400628..6403099 (+)	2472	WP_043096086.1	penicillin-binding protein 1A	-
QRQ54_RS29765 (PAE3796A_29640)	-	6403195..6404463 (-)	1269	WP_003095842.1	malic enzyme	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=1160146 QRQ54_RS29755 WP_003110888.1 6399379..6400443(-) (pilM) [Pseudomonas aeruginosa strain 3796A isolate 3796A]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1160146 QRQ54_RS29755 WP_003110888.1 6399379..6400443(-) (pilM) [Pseudomonas aeruginosa strain 3796A isolate 3796A]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGACTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGGCTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGCCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466