Detailed information NTG1159565

Bioinformatically predicted

Overview

• Name: covR
• Type: Regulator
• Locus tag: QOR68_RS08615
• Genome accession: NZ_OX460984
• Coordinates: 1660814..1661503 (-)
• Length: 229 a.a.
• NCBI ID: WP_283572929.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae isolate MRI Z2-172
• Function: repress comR expression (predicted from homology) Competence regulation

Genomic Context

Location: 1655814..1666503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR68_RS08595	dnaI	1656617..1657519 (-)	903	WP_000843626.1	primosomal protein DnaI	-
QOR68_RS08600	-	1657516..1658691 (-)	1176	WP_000074512.1	DnaD domain protein	-
QOR68_RS08605	nrdR	1658691..1659170 (-)	480	WP_001203682.1	transcriptional regulator NrdR	-
QOR68_RS08610	-	1659319..1660824 (-)	1506	WP_000791108.1	HAMP domain-containing histidine kinase	-
QOR68_RS08615	covR	1660814..1661503 (-)	690	WP_283572929.1	response regulator transcription factor	Regulator
QOR68_RS08620	-	1661738..1662271 (-)	534	WP_000927549.1	YceD family protein	-
QOR68_RS08625	htpX	1662376..1663266 (-)	891	WP_000966825.1	zinc metalloprotease HtpX	-
QOR68_RS08630	-	1663287..1663841 (-)	555	WP_000537055.1	LemA family protein	-
QOR68_RS08635	rsmG	1663969..1664682 (+)	714	WP_000188797.1	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	-
QOR68_RS08640	-	1664697..1666076 (+)	1380	WP_000680112.1	potassium transporter TrkG	-

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 26533.53 Da
• Isoelectric Point: 4.8094

>NTDB_id=1159565 QOR68_RS08615 WP_283572929.1 1660814..1661503(-) (covR) [Streptococcus agalactiae isolate MRI Z2-172]
MGKKILIIEDEKNLARFVSLELLHEGYDVVVETNGREGLDTGLEKDFDLILLDLMLPEMDGFEITRRLQAEKTTYIMMMT
ARDSVMDIVAGLDRGADDYIVKPFAIEELLARVRAIFRRQEIETKTKEKGDSGSFRDLSLNTHNRSAMRGDEEISLTKRE
FDLLNVLMTNMNRVMTREELLEHVWKYDVAAETNVVDVYIRYLRGKIDIPGRESYIQTVRGMGYVIREK

Nucleotide

• Length: 690 bp

>NTDB_id=1159565 QOR68_RS08615 WP_283572929.1 1660814..1661503(-) (covR) [Streptococcus agalactiae isolate MRI Z2-172]
ATGGGTAAAAAGATCTTAATAATCGAAGATGAGAAAAATTTAGCTCGCTTCGTCTCGTTAGAACTACTACATGAAGGATA
TGATGTTGTTGTTGAAACAAACGGTCGTGAAGGATTGGACACAGGATTAGAAAAAGATTTTGATTTGATTCTACTGGATT
TAATGCTTCCAGAGATGGATGGTTTCGAAATCACACGTCGCCTGCAGGCTGAAAAAACAACCTATATCATGATGATGACA
GCACGTGATTCTGTTATGGATATTGTAGCTGGTCTTGATCGTGGAGCAGATGATTATATTGTTAAGCCGTTTGCAATCGA
AGAATTATTAGCACGTGTTAGGGCGATTTTCCGACGCCAAGAAATTGAAACGAAGACAAAAGAAAAAGGTGATAGCGGTA
GTTTCCGTGATTTATCATTAAATACTCATAATCGTTCAGCGATGCGTGGTGATGAGGAAATTTCACTAACAAAACGTGAA
TTTGATTTATTGAATGTCTTGATGACAAATATGAATCGTGTTATGACACGAGAAGAGTTGCTAGAACATGTTTGGAAATA
CGATGTGGCAGCAGAGACAAACGTTGTTGATGTTTATATCCGTTACCTAAGAGGTAAAATTGATATCCCAGGTCGTGAAT
CATATATTCAAACTGTTCGCGGAATGGGCTATGTGATTCGTGAAAAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (5-114)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (152-225)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
covR	Streptococcus salivarius strain HSISS4	79.039	100	0.79
covR	Lactococcus lactis subsp. lactis strain DGCC12653	65.789	99.563	0.655
vicR	Streptococcus mutans UA159	45.887	100	0.463
micA	Streptococcus pneumoniae Cp1015	43.478	100	0.437