Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QOR48_RS08595 | Genome accession | NZ_OX460942 |
| Coordinates | 1670949..1671440 (-) | Length | 163 a.a. |
| NCBI ID | WP_000609585.1 | Uniprot ID | A0AAV3JH34 |
| Organism | Streptococcus agalactiae isolate MRI Z2-158 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1665949..1676440
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QOR48_RS08580 | - | 1668855..1669526 (-) | 672 | WP_000174846.1 | DUF1129 family protein | - |
| QOR48_RS08585 | - | 1669551..1670495 (-) | 945 | WP_000812121.1 | magnesium transporter CorA family protein | - |
| QOR48_RS08590 | rpsR | 1670665..1670904 (-) | 240 | WP_000068665.1 | 30S ribosomal protein S18 | - |
| QOR48_RS08595 | ssbA | 1670949..1671440 (-) | 492 | WP_000609585.1 | single-stranded DNA-binding protein | Machinery gene |
| QOR48_RS08600 | rpsF | 1671452..1671739 (-) | 288 | WP_001151773.1 | 30S ribosomal protein S6 | - |
| QOR48_RS08605 | mutY | 1672802..1673956 (+) | 1155 | WP_161512068.1 | A/G-specific adenine glycosylase | - |
| QOR48_RS08610 | - | 1674133..1674726 (+) | 594 | WP_000402395.1 | helix-turn-helix transcriptional regulator | - |
| QOR48_RS08615 | trxA | 1674772..1675104 (-) | 333 | WP_001932060.1 | thioredoxin | - |
| QOR48_RS08620 | - | 1675167..1675667 (-) | 501 | WP_000446812.1 | phosphatase PAP2 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18165.81 Da Isoelectric Point: 4.9119
>NTDB_id=1159208 QOR48_RS08595 WP_000609585.1 1670949..1671440(-) (ssbA) [Streptococcus agalactiae isolate MRI Z2-158]
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=1159208 QOR48_RS08595 WP_000609585.1 1670949..1671440(-) (ssbA) [Streptococcus agalactiae isolate MRI Z2-158]
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACACGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAATGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACACGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAATGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.714 |
100 |
0.62 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.064 |
100 |
0.62 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.963 |
66.871 |
0.374 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
65.031 |
0.368 |