Detailed information NTG1158442

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QMX71_RS04985
• Genome accession: NZ_OX458332
• Coordinates: 1076452..1077522 (-)
• Length: 356 a.a.
• NCBI ID: WP_274517079.1
• Uniprot ID: -
• Organism: Methylococcus capsulatus isolate Mc(Nor)
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1071452..1082522

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMX71_RS04960 (MCNOR_1052)	aroK	1071893..1072432 (-)	540	WP_010959691.1	shikimate kinase AroK	-
QMX71_RS04965 (MCNOR_1053)	pilQ	1072494..1074554 (-)	2061	WP_238536855.1	type IV pilus secretin PilQ	-
QMX71_RS04970 (MCNOR_1054)	-	1074670..1075212 (-)	543	WP_010959689.1	pilus assembly protein PilP	-
QMX71_RS04975 (MCNOR_1055)	-	1075212..1075850 (-)	639	WP_017365265.1	type 4a pilus biogenesis protein PilO	-
QMX71_RS04980 (MCNOR_1056)	-	1075847..1076452 (-)	606	WP_017365266.1	PilN domain-containing protein	-
QMX71_RS04985 (MCNOR_1057)	pilM	1076452..1077522 (-)	1071	WP_274517079.1	pilus assembly protein PilM	Machinery gene
QMX71_RS04990 (MCNOR_1059)	-	1077824..1080271 (+)	2448	WP_256996377.1	penicillin-binding protein 1A	-
QMX71_RS04995 (MCNOR_1060)	-	1080287..1080898 (+)	612	WP_026045942.1	hypothetical protein	-
QMX71_RS05000 (MCNOR_1061)	rpmE	1080934..1081137 (-)	204	WP_010959683.1	50S ribosomal protein L31	-
QMX71_RS05005 (MCNOR_1062)	-	1081252..1082025 (+)	774	WP_010959682.1	exodeoxyribonuclease III	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 38715.27 Da
• Isoelectric Point: 4.9350

>NTDB_id=1158442 QMX71_RS04985 WP_274517079.1 1076452..1077522(-) (pilM) [Methylococcus capsulatus isolate Mc(Nor)]
MSAMWGLGRKKPLLLGIDISAAAVKLLELSRKNGGYQVESYGVVPLPRNTVVDNTLAEPDNVSAAVRAVVKQSGTALRHA
VVAVPGSVVITKRIALPANLEGDELEAQIELEADQYIPHAREEVSLDFEVLGKNPKNPDLLDVLLVATRRENVEDRVSVL
ENAGLGVEIVDVESYAIERAFELVRDQLPPLLRDRAVAVADVGAMATTLNVIHGGSIIYTREQGFGGMQLTDEIQRRYGL
TYEEAGLAKKEGSLPGNYAEEVLEPFKHALVQQISRSFQFYLSSTAQRGFDAVVLAGGCAMIPGIDRYVEAALQVPTVIA
NPFRHMSFSGRVRQERLSYDSSALMLACGLALRSFD

Nucleotide

• Length: 1071 bp

>NTDB_id=1158442 QMX71_RS04985 WP_274517079.1 1076452..1077522(-) (pilM) [Methylococcus capsulatus isolate Mc(Nor)]
ATGTCAGCCATGTGGGGCTTAGGAAGGAAGAAACCGCTCCTGCTGGGGATCGACATCAGCGCGGCGGCGGTCAAGCTGCT
CGAGCTGAGCAGAAAGAACGGCGGCTACCAGGTGGAAAGCTATGGCGTTGTGCCTTTGCCCCGCAACACGGTGGTCGACA
ACACCCTTGCCGAGCCGGACAACGTGTCGGCGGCGGTCCGGGCCGTGGTCAAACAGTCGGGGACCGCGCTCAGGCACGCG
GTGGTCGCTGTGCCTGGCTCGGTGGTCATCACCAAGCGCATCGCCCTACCCGCCAACCTGGAGGGCGACGAACTCGAGGC
GCAGATCGAACTGGAGGCGGACCAGTACATTCCTCACGCCAGGGAGGAAGTCAGCCTGGATTTCGAGGTGCTGGGGAAGA
ATCCGAAGAATCCCGATCTGCTGGATGTGCTGCTGGTGGCGACTCGCCGGGAGAACGTGGAAGACCGGGTCTCGGTACTG
GAAAATGCCGGACTCGGCGTCGAGATCGTCGATGTCGAGTCCTATGCCATCGAACGCGCCTTCGAACTTGTCCGGGATCA
GCTTCCACCGCTCCTCCGCGACCGGGCGGTTGCCGTAGCCGATGTGGGCGCCATGGCCACGACGCTCAACGTCATCCATG
GCGGTTCCATCATCTACACGCGGGAACAGGGTTTCGGCGGCATGCAGCTCACCGACGAGATCCAGCGGCGCTACGGTTTG
ACCTACGAGGAAGCGGGGCTGGCGAAGAAGGAGGGGAGCCTTCCCGGCAACTATGCCGAAGAGGTGCTGGAGCCGTTCAA
GCATGCCTTGGTTCAGCAGATCAGCCGATCGTTCCAGTTCTATCTGTCGTCCACTGCGCAGCGTGGTTTCGATGCGGTGG
TGCTGGCCGGCGGCTGCGCCATGATTCCGGGGATAGACCGTTACGTCGAGGCGGCGTTGCAGGTTCCCACCGTGATTGCC
AATCCCTTCCGTCACATGAGTTTTTCGGGAAGGGTGCGGCAGGAGCGCCTGAGTTACGATTCATCCGCCCTGATGCTGGC
ATGCGGCCTGGCACTGCGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (16-355)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.603	96.348	0.497
comM	Acinetobacter nosocomialis M2	51.02	96.348	0.492
comM	Acinetobacter baylyi ADP1	49.138	97.753	0.48
pilM	Legionella pneumophila strain ERS1305867	42.733	96.629	0.413