Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | KJP45_RS12210 | Genome accession | NZ_OX419578 |
| Coordinates | 2388257..2388592 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis isolate NRS6128 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2383257..2393592
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP45_RS12190 (NRS6128_12095) | gcvT | 2383850..2384938 (-) | 1089 | WP_080529534.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| KJP45_RS12195 (NRS6128_12100) | yqhH | 2385379..2387052 (+) | 1674 | WP_003230203.1 | SNF2-related protein | - |
| KJP45_RS12200 (NRS6128_12105) | yqhG | 2387073..2387867 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| KJP45_RS12205 (NRS6128_12110) | sinI | 2388050..2388223 (+) | 174 | WP_003230187.1 | anti-repressor SinI family protein | Regulator |
| KJP45_RS12210 (NRS6128_12115) | sinR | 2388257..2388592 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| KJP45_RS12215 (NRS6128_12120) | tasA | 2388685..2389470 (-) | 786 | WP_003230183.1 | biofilm matrix protein TasA | - |
| KJP45_RS12220 (NRS6128_12125) | sipW | 2389534..2390106 (-) | 573 | WP_003230181.1 | signal peptidase I | - |
| KJP45_RS12225 (NRS6128_12130) | tapA | 2390090..2390851 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| KJP45_RS12230 (NRS6128_12135) | yqzG | 2391123..2391449 (+) | 327 | WP_029317915.1 | YqzG/YhdC family protein | - |
| KJP45_RS12235 (NRS6128_12140) | spoIIT | 2391491..2391670 (-) | 180 | WP_213414620.1 | YqzE family protein | - |
| KJP45_RS12240 (NRS6128_12145) | comGG | 2391741..2392115 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| KJP45_RS12245 | comGF | 2392116..2392499 (-) | 384 | WP_080529536.1 | ComG operon protein ComGF | Machinery gene |
| KJP45_RS12250 (NRS6128_12155) | comGE | 2392525..2392872 (-) | 348 | WP_080529537.1 | ComG operon protein 5 | Machinery gene |
| KJP45_RS12255 (NRS6128_12160) | comGD | 2392856..2393287 (-) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| KJP45_RS12260 (NRS6128_12165) | comGC | 2393277..2393573 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=1157827 KJP45_RS12210 WP_003226345.1 2388257..2388592(+) (sinR) [Bacillus subtilis isolate NRS6128]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=1157827 KJP45_RS12210 WP_003226345.1 2388257..2388592(+) (sinR) [Bacillus subtilis isolate NRS6128]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |