Detailed information NTG1155628

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: QNH80_RS06985
• Genome accession: NZ_OX352996
• Coordinates: 1452142..1452576 (-)
• Length: 144 a.a.
• NCBI ID: WP_011922561.1
• Uniprot ID: -
• Organism: Streptococcus suis isolate 861160_dhsdS
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1447142..1457576

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH80_RS06960	-	1447330..1448586 (-)	1257	WP_012775475.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
QNH80_RS06965	-	1448642..1449193 (-)	552	WP_012775474.1	folate family ECF transporter S component	-
QNH80_RS06970	-	1449507..1450694 (-)	1188	WP_012775473.1	acetate kinase	-
QNH80_RS06975	comYH	1450744..1451697 (-)	954	WP_024406069.1	class I SAM-dependent methyltransferase	Machinery gene
QNH80_RS06980	comGG	1451754..1452164 (-)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
QNH80_RS06985	comGF/cglF	1452142..1452576 (-)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
QNH80_RS06990	comYE	1452563..1452856 (-)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
QNH80_RS06995	comGD	1452828..1453235 (-)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
QNH80_RS07000	comYC	1453216..1453497 (-)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
QNH80_RS07005	comYB	1453499..1454536 (-)	1038	WP_255304289.1	competence type IV pilus assembly protein ComGB	Machinery gene
QNH80_RS07010	comYA	1454448..1455398 (-)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
QNH80_RS07015	-	1455484..1456427 (+)	944	Protein_1374	S66 peptidase family protein	-
QNH80_RS07020	-	1456462..1456827 (-)	366	WP_002936568.1	DUF1033 family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16491.85 Da
• Isoelectric Point: 5.9234

>NTDB_id=1155628 QNH80_RS06985 WP_011922561.1 1452142..1452576(-) (comGF/cglF) [Streptococcus suis isolate 861160_dhsdS]
MLKSKIPAFTLLECLVVLVILSGSLLIFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=1155628 QNH80_RS06985 WP_011922561.1 1452142..1452576(-) (comGF/cglF) [Streptococcus suis isolate 861160_dhsdS]
TTGTTAAAAAGTAAAATTCCTGCTTTTACACTCTTGGAATGTTTGGTGGTTCTAGTCATTCTGTCAGGTAGCCTCTTGAT
TTTTGAAGGCTTATCCAAATTACTAGTCCAGGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae Rx1	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae D39	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae R6	52.482	97.917	0.514
comGF/cglF	Streptococcus mitis NCTC 12261	52.985	93.056	0.493
comYF	Streptococcus mutans UA140	48.611	100	0.486
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF/cglF	Streptococcus mitis SK321	50	93.056	0.465
comGF	Lactococcus lactis subsp. cremoris KW2	45.39	97.917	0.444