Detailed information    

insolico Bioinformatically predicted

Overview


Name   micB   Type   Regulator
Locus tag   NBW44_RS02855 Genome accession   NZ_OW724079
Coordinates   571805..573154 (+) Length   449 a.a.
NCBI ID   WP_250307131.1    Uniprot ID   -
Organism   Streptococcus sp. Marseille-Q3533     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 566805..578154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NBW44_RS02840 - 567494..569767 (-) 2274 WP_250307128.1 Xaa-Pro dipeptidyl-peptidase -
  NBW44_RS02845 mutY 569880..571043 (+) 1164 WP_250307129.1 A/G-specific adenine glycosylase -
  NBW44_RS02850 micA 571108..571812 (+) 705 WP_250307130.1 response regulator YycF Regulator
  NBW44_RS02855 micB 571805..573154 (+) 1350 WP_250307131.1 cell wall metabolism sensor histidine kinase VicK Regulator
  NBW44_RS02860 vicX 573156..573965 (+) 810 WP_250307132.1 MBL fold metallo-hydrolase Regulator
  NBW44_RS02865 - 574001..574348 (-) 348 WP_250307133.1 thioredoxin -
  NBW44_RS02870 - 574455..576173 (-) 1719 WP_250307134.1 phospho-sugar mutase -

Sequence


Protein


Download         Length: 449 a.a.        Molecular weight: 51490.72 Da        Isoelectric Point: 4.5621

>NTDB_id=1152593 NBW44_RS02855 WP_250307131.1 571805..573154(+) (micB) [Streptococcus sp. Marseille-Q3533]
MIETIRQTFLTRDFVFGLILIGFIMLVTFLLLESRRDNVRLKQLNQKVKDLIAGDYSQVLDMQGSSEITNITNNLNDLSE
VIRLTQENLEQESKRLNSILSYMTDGVLATNRRGQIIMINDMAKRQLGVERDEALNQNILELLRIDDEYELRDLITQSPE
LMIDSQDVNGEYISIRVRFALVRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNATSNLDVELINFTAFITFILNRFDKIKSQDENLKYELIRDYPITSVW
IEIDTDKMTQVIDNILNNAIKYSPDGGKITVSMKTTDDQMILSISDQGLGIPKQDLPKIFDRFYRVDKARSRAQGGTGLG
LAIAKEIIKQHNGFIWAKSEYGKGSTFTIVLPYDKDAVKDEIWEDELED

Nucleotide


Download         Length: 1350 bp        

>NTDB_id=1152593 NBW44_RS02855 WP_250307131.1 571805..573154(+) (micB) [Streptococcus sp. Marseille-Q3533]
ATGATTGAAACAATTAGACAGACATTTTTAACCAGAGATTTCGTCTTTGGACTCATTTTAATCGGATTTATCATGCTTGT
TACCTTTCTTTTACTAGAAAGTCGAAGAGATAATGTCCGTCTTAAACAACTGAACCAAAAAGTCAAGGATTTGATTGCAG
GAGATTATTCTCAAGTTTTGGATATGCAAGGAAGTTCAGAGATAACTAATATTACAAATAATCTTAATGACTTATCTGAA
GTTATCCGCCTAACTCAAGAAAATCTTGAGCAAGAGAGTAAAAGATTGAATAGCATTCTCTCCTATATGACGGATGGAGT
CCTTGCAACCAATCGTCGTGGTCAGATCATTATGATTAATGATATGGCTAAAAGACAACTTGGTGTTGAGAGAGACGAGG
CTCTGAATCAGAATATTTTAGAATTGCTTAGGATTGATGACGAGTATGAGTTGAGAGACCTAATTACTCAAAGTCCGGAA
TTGATGATAGATTCTCAGGATGTGAATGGAGAATACATAAGTATTCGTGTGCGTTTTGCTCTTGTTCGTAGAGAATCTGG
CTTTATTTCAGGTCTTGTTGCTGTATTACACGATACAACTGAACAAGAGAAGGAAGAACGGGAGAGAAGGCTCTTCGTAT
CGAATGTTAGCCATGAACTGCGAACTCCTTTGACCAGTGTAAAATCTTATCTAGAGGCCTTGGATGAAGGTGCTTTGTCA
GAACCAGTTGCGCCTGATTTTATTAAAGTATCATTAGATGAGACCAATCGAATGATGCGAATGGTAACAGATCTCTTACA
TCTATCGCGTATTGATAATGCTACTAGCAACTTAGATGTTGAATTAATTAATTTTACTGCATTCATTACCTTTATCCTCA
ATCGTTTTGATAAAATCAAAAGTCAGGATGAGAATCTGAAGTATGAATTAATTAGAGATTATCCAATTACTTCCGTATGG
ATTGAGATCGATACAGATAAGATGACTCAGGTGATTGATAATATTTTAAACAATGCTATCAAATATTCACCAGACGGTGG
GAAAATCACTGTTTCTATGAAAACAACTGACGATCAGATGATTCTATCTATTTCCGATCAAGGATTGGGAATTCCAAAAC
AAGATTTACCGAAGATTTTTGACCGTTTCTACAGGGTTGATAAGGCTAGAAGTCGTGCACAAGGTGGAACTGGTTTAGGT
CTTGCGATAGCAAAAGAAATCATCAAGCAACACAATGGATTTATCTGGGCCAAAAGTGAATATGGTAAAGGCTCAACCTT
TACTATTGTGCTTCCTTATGATAAGGATGCTGTAAAAGATGAAATTTGGGAGGATGAACTAGAAGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  micB Streptococcus pneumoniae Cp1015

85.649

97.773

0.837

  vicK Streptococcus mutans UA159

72.263

91.537

0.661


Multiple sequence alignment