Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NBW44_RS02860 Genome accession   NZ_OW724079
Coordinates   573156..573965 (+) Length   269 a.a.
NCBI ID   WP_250307132.1    Uniprot ID   -
Organism   Streptococcus sp. Marseille-Q3533     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 568156..578965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NBW44_RS02845 mutY 569880..571043 (+) 1164 WP_250307129.1 A/G-specific adenine glycosylase -
  NBW44_RS02850 micA 571108..571812 (+) 705 WP_250307130.1 response regulator YycF Regulator
  NBW44_RS02855 micB 571805..573154 (+) 1350 WP_250307131.1 cell wall metabolism sensor histidine kinase VicK Regulator
  NBW44_RS02860 vicX 573156..573965 (+) 810 WP_250307132.1 MBL fold metallo-hydrolase Regulator
  NBW44_RS02865 - 574001..574348 (-) 348 WP_250307133.1 thioredoxin -
  NBW44_RS02870 - 574455..576173 (-) 1719 WP_250307134.1 phospho-sugar mutase -
  NBW44_RS02875 - 576326..578227 (+) 1902 WP_250307135.1 ABC-F family ATP-binding cassette domain-containing protein -
  NBW44_RS02885 mscL 578472..578849 (-) 378 WP_250307136.1 large conductance mechanosensitive channel protein MscL -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29970.92 Da        Isoelectric Point: 6.1732

>NTDB_id=1152594 NBW44_RS02860 WP_250307132.1 573156..573965(+) (vicX) [Streptococcus sp. Marseille-Q3533]
MNEKGFKYSILASGSSGNSFYLETPKRKILVDAGLSGKKITSLLGEINRKPEDLDAILITHEHADHIHGIGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGADAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFQVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1152594 NBW44_RS02860 WP_250307132.1 573156..573965(+) (vicX) [Streptococcus sp. Marseille-Q3533]
ATGAATGAAAAAGGATTTAAATATAGTATTTTAGCATCGGGTTCTAGTGGAAATTCGTTTTACTTAGAAACACCCAAAAG
GAAGATTTTAGTTGATGCCGGTTTATCTGGCAAAAAAATCACAAGCTTATTGGGGGAAATTAACCGTAAGCCAGAAGATT
TGGATGCTATTCTGATAACTCATGAACACGCAGATCATATCCATGGCATCGGTGTTCTGGCTCGTAAGTATGGAATGGAT
CTTTATGCTAATGAAAAAACTTGGCAAGCTATGGAAAATAGTAAGTACCTAGGAAAAGTTGACTCTTCTCAAAAACATAT
CTTTGAAATGGGAAAAACTAAAACTTTCGGAGATATCGACATTGAGAGTTTTGGTGTTAGTCATGATGCAGTCGCTCCCC
AGTTTTACCGCTTTATGAAGGATGACAAGAGCTTTGTTATGCTGACAGATACAGGTTATGTTAGTGACCGTATGGCCGGC
ATTGTCGAGAATGCAGATGGCTACTTGATTGAGTCTAATCATGATGTAGAAATACTTCGAGCGGGTTCTTACGCATGGCG
ACTTAAACAACGAATCCTATCTGACCTAGGCCATCTTTCAAATGAAGATGGAGCAGACGCCATGATTCGCACACTAGGTA
ATCGTACCAAGAAGATTTACCTAGGACATCTATCTAAAGAGAATAATATCAAGGAGCTAGCCCACATGACCATGGTCAAT
CAGTTAGCTCAAGCAGATCTAGGAGTAGGAGTGGATTTTCAAGTTTACGATACGTCTCCAGACACTGCAACACCACTAAC
AGACATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment