Detailed information
Bioinformatically predicted
Overview
| Name | comFC/cflB | Type | Machinery gene |
| Locus tag | MMH06_RS02890 | Genome accession | NZ_OV904788 |
| Coordinates | 547061..547723 (+) | Length | 220 a.a. |
| NCBI ID | WP_000649968.1 | Uniprot ID | A0A098Z9B1 |
| Organism | Streptococcus pneumoniae strain RMV7 isolate RMV7domi | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 542061..552723
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MMH06_RS02860 (IONPJBJN_00559) | tnpB | 542512..542835 (+) | 324 | WP_000973416.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| MMH06_RS02865 (IONPJBJN_00560) | - | 542976..543284 (-) | 309 | Protein_566 | transposase | - |
| MMH06_RS02870 (IONPJBJN_00561) | - | 543266..543795 (+) | 530 | Protein_567 | transposase | - |
| MMH06_RS02875 (IONPJBJN_00562) | cysK | 543870..544790 (-) | 921 | WP_000029860.1 | cysteine synthase A | - |
| MMH06_RS02880 (IONPJBJN_00563) | - | 545075..545710 (-) | 636 | WP_000395746.1 | YigZ family protein | - |
| MMH06_RS02885 (IONPJBJN_00564) | comFA/cflA | 545766..547064 (+) | 1299 | WP_000867608.1 | DEAD/DEAH box helicase | Machinery gene |
| MMH06_RS02890 (IONPJBJN_00565) | comFC/cflB | 547061..547723 (+) | 663 | WP_000649968.1 | ComF family protein | Machinery gene |
| MMH06_RS02895 (IONPJBJN_00566) | raiA | 547803..548351 (+) | 549 | WP_000599104.1 | ribosome-associated translation inhibitor RaiA | - |
| MMH06_RS02900 (IONPJBJN_00567) | - | 548487..550460 (+) | 1974 | WP_000715111.1 | DHH family phosphoesterase | - |
| MMH06_RS02905 (IONPJBJN_00568) | rplI | 550457..550909 (+) | 453 | WP_000864220.1 | 50S ribosomal protein L9 | - |
| MMH06_RS02910 (IONPJBJN_00569) | dnaB | 550953..552305 (+) | 1353 | WP_000852486.1 | replicative DNA helicase | - |
| MMH06_RS02915 (IONPJBJN_00570) | - | 552307..552573 (+) | 267 | WP_001278167.1 | Veg family protein | - |
Sequence
Protein
Download Length: 220 a.a. Molecular weight: 25203.05 Da Isoelectric Point: 7.7116
>NTDB_id=1152076 MMH06_RS02890 WP_000649968.1 547061..547723(+) (comFC/cflB) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
MKCLLCGQTMKTVLTFSSLLLLRNDDSCLCSDCDSTFERIGEENCPNCMKTELSTKCQDCQFWCKEGVGVSHRAIFTYNQ
AMKDFFSRYKFDGDFLLRKVFASFLSEELKKYKEYQFVVIPLSPDRYANRGFNQVEGLVEAAGFEYLDLLEKREERASSS
KNRSERLGTELPFFIKSGVTIPKKILLIDDIYTTGATINRVKKLLEEAGAKDVKTFSLVR
MKCLLCGQTMKTVLTFSSLLLLRNDDSCLCSDCDSTFERIGEENCPNCMKTELSTKCQDCQFWCKEGVGVSHRAIFTYNQ
AMKDFFSRYKFDGDFLLRKVFASFLSEELKKYKEYQFVVIPLSPDRYANRGFNQVEGLVEAAGFEYLDLLEKREERASSS
KNRSERLGTELPFFIKSGVTIPKKILLIDDIYTTGATINRVKKLLEEAGAKDVKTFSLVR
Nucleotide
Download Length: 663 bp
>NTDB_id=1152076 MMH06_RS02890 WP_000649968.1 547061..547723(+) (comFC/cflB) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
ATGAAGTGCTTGTTATGTGGGCAGACTATGAAGACTGTTTTAACTTTTAGTAGTCTCTTACTTCTGAGGAATGATGACTC
TTGTCTTTGTTCAGACTGTGATTCTACTTTTGAAAGAATTGGGGAAGAGAACTGTCCAAATTGTATGAAAACAGAGTTGT
CAACAAAGTGTCAAGATTGTCAATTTTGGTGTAAAGAAGGAGTTGGAGTCAGTCATAGAGCGATTTTTACTTACAATCAA
GCTATGAAGGATTTTTTCAGTCGGTATAAGTTTGATGGAGACTTCCTGTTAAGAAAAGTTTTCGCTTCATTTTTAAGTGA
GGAGTTGAAAAAGTACAAAGAGTATCAATTTGTTGTAATTCCCCTAAGTCCTGATAGATATGCTAATAGAGGATTTAATC
AGGTTGAGGGCTTGGTAGAGGCAGCAGGCTTTGAGTATCTGGATTTATTAGAGAAAAGAGAAGAGAGAGCCAGTTCTTCT
AAAAATCGTTCAGAGCGCTTGGGGACAGAACTTCCTTTCTTTATTAAAAGTGGAGTCACTATTCCTAAAAAAATCCTACT
TATAGATGATATCTATACTACAGGAGCAACTATAAATCGTGTTAAGAAACTGTTGGAAGAAGCTGGTGCTAAGGATGTAA
AAACATTTTCCCTTGTAAGATGA
ATGAAGTGCTTGTTATGTGGGCAGACTATGAAGACTGTTTTAACTTTTAGTAGTCTCTTACTTCTGAGGAATGATGACTC
TTGTCTTTGTTCAGACTGTGATTCTACTTTTGAAAGAATTGGGGAAGAGAACTGTCCAAATTGTATGAAAACAGAGTTGT
CAACAAAGTGTCAAGATTGTCAATTTTGGTGTAAAGAAGGAGTTGGAGTCAGTCATAGAGCGATTTTTACTTACAATCAA
GCTATGAAGGATTTTTTCAGTCGGTATAAGTTTGATGGAGACTTCCTGTTAAGAAAAGTTTTCGCTTCATTTTTAAGTGA
GGAGTTGAAAAAGTACAAAGAGTATCAATTTGTTGTAATTCCCCTAAGTCCTGATAGATATGCTAATAGAGGATTTAATC
AGGTTGAGGGCTTGGTAGAGGCAGCAGGCTTTGAGTATCTGGATTTATTAGAGAAAAGAGAAGAGAGAGCCAGTTCTTCT
AAAAATCGTTCAGAGCGCTTGGGGACAGAACTTCCTTTCTTTATTAAAAGTGGAGTCACTATTCCTAAAAAAATCCTACT
TATAGATGATATCTATACTACAGGAGCAACTATAAATCGTGTTAAGAAACTGTTGGAAGAAGCTGGTGCTAAGGATGTAA
AAACATTTTCCCTTGTAAGATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC/cflB | Streptococcus pneumoniae Rx1 |
99.545 |
100 |
0.995 |
| comFC/cflB | Streptococcus pneumoniae D39 |
99.545 |
100 |
0.995 |
| comFC/cflB | Streptococcus pneumoniae R6 |
99.545 |
100 |
0.995 |
| comFC/cflB | Streptococcus pneumoniae TIGR4 |
99.091 |
100 |
0.991 |
| comFC/cflB | Streptococcus mitis SK321 |
91.364 |
100 |
0.914 |
| comFC/cflB | Streptococcus mitis NCTC 12261 |
90.909 |
100 |
0.909 |