Detailed information NTG1151812

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LQ983_RS04040
• Genome accession: NZ_OV100759
• Coordinates: 874454..875569 (+)
• Length: 371 a.a.
• NCBI ID: WP_111295660.1
• Uniprot ID: A0A8B2U6K7
• Organism: Aggregatibacter sp. Marseille-P9115
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 869454..880569

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LQ983_RS04015	lexA	872068..872691 (+)	624	WP_006716824.1	transcriptional repressor LexA	-
LQ983_RS04020	rpsF	872843..873220 (+)	378	WP_005555822.1	30S ribosomal protein S6	-
LQ983_RS04025	priB	873207..873533 (+)	327	WP_109103906.1	primosomal replication protein N	-
LQ983_RS04030	rpsR	873546..873776 (+)	231	WP_005541294.1	30S ribosomal protein S18	-
LQ983_RS04035	rplI	873792..874241 (+)	450	WP_006716790.1	50S ribosomal protein L9	-
LQ983_RS04040	dprA	874454..875569 (+)	1116	WP_111295660.1	DNA-processing protein DprA	Machinery gene
LQ983_RS04045	-	875790..876380 (-)	591	WP_230622602.1	sigma-70 family RNA polymerase sigma factor	-
LQ983_RS04050	-	876537..876827 (-)	291	WP_111295656.1	hypothetical protein	-
LQ983_RS04055	-	877059..879032 (-)	1974	WP_230621741.1	LTA synthase family protein	-
LQ983_RS04060	-	879101..879760 (-)	660	WP_230621742.1	NAD(P)H-dependent oxidoreductase	-
LQ983_RS04065	yggU	879879..880172 (-)	294	WP_230621743.1	DUF167 family protein YggU	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 41749.67 Da
• Isoelectric Point: 5.7676

>NTDB_id=1151812 LQ983_RS04040 WP_111295660.1 874454..875569(+) (dprA) [Aggregatibacter sp. Marseille-P9115]
MNTHLPLFLRLLQIPKLGPTSIQKILDQVNLFDLQDYDVTAFKHIGWNAQQIQAWFNPEKRYIEPALLWGEKEGNHILDY
YHPDYPKQLKQIDSAPPVLFVKGETSTLSHPQIAIVGSRQCSSYGEYWAKYFASELTTNGFIITSGLALGIDGFCHQAAV
DLGQPTIAVLGSGLEEVYPAKHRKLAQHIIEQGGALVSEFFPLQPPIAENFPRRNRIISGLSLATLIIEATERSGSLITA
RYALEQNREIFALPGNIQSQFSQGCHKLIKQGAMLVENVEDILENLAPQMAWKEHLKNRPHFSSPTTISPQQEEKVSPTY
PELYQAIGYTPISIDSLSSTLNLSVEQLLIQLLELELQELIYSENGLYRRT

Nucleotide

• Length: 1116 bp

>NTDB_id=1151812 LQ983_RS04040 WP_111295660.1 874454..875569(+) (dprA) [Aggregatibacter sp. Marseille-P9115]
ATGAACACCCATTTACCCCTTTTCCTTCGCCTATTACAAATTCCTAAACTAGGCCCAACCTCAATTCAAAAAATACTTGA
TCAAGTAAATTTATTTGATTTACAAGATTACGATGTTACCGCATTCAAACATATAGGTTGGAATGCCCAACAAATCCAAG
CGTGGTTCAATCCTGAAAAACGCTATATTGAACCGGCACTTTTATGGGGAGAAAAAGAAGGAAATCATATTCTTGATTAT
TATCATCCGGATTATCCTAAGCAATTAAAACAAATTGACAGCGCACCACCAGTGTTATTCGTCAAAGGTGAAACATCCAC
CTTATCTCACCCACAGATTGCTATCGTTGGCAGTCGCCAATGTTCTAGTTATGGGGAATACTGGGCAAAGTATTTTGCCT
CAGAACTAACAACCAATGGTTTCATCATTACCAGTGGGCTCGCCTTGGGCATTGACGGATTTTGCCATCAAGCAGCTGTA
GATTTGGGACAGCCGACTATCGCGGTATTAGGGAGTGGATTGGAAGAGGTTTATCCGGCGAAACACCGTAAATTGGCACA
ACATATCATTGAACAAGGTGGCGCGTTAGTTTCTGAGTTTTTCCCGTTGCAACCGCCTATCGCAGAAAACTTTCCCCGCC
GTAATCGCATTATCAGCGGATTATCTCTCGCGACATTAATTATCGAAGCCACGGAACGTAGCGGATCTTTAATCACAGCC
CGTTACGCATTGGAACAAAACCGAGAAATTTTTGCTCTACCCGGCAATATCCAAAGTCAATTTAGCCAAGGCTGCCATAA
ACTTATTAAACAAGGCGCGATGCTAGTAGAAAATGTAGAAGATATTTTAGAAAACCTTGCACCACAAATGGCATGGAAAG
AACACCTGAAAAATAGACCGCACTTTTCTTCCCCAACGACCATTTCTCCGCAACAAGAGGAAAAGGTATCGCCTACTTAT
CCTGAACTTTATCAAGCGATTGGGTATACGCCAATCAGCATTGATTCCCTCTCTAGCACACTCAATTTGTCGGTGGAGCA
ACTTCTTATTCAGCTTTTAGAATTAGAACTTCAAGAACTGATTTACAGTGAAAACGGGTTATACCGCCGCACTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

• DprA winged helix domain (DprA_WH) (310-363)

3D structure

• AlphaFold DB: A0A8B2U6K7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	59.786	100	0.601
dprA	Glaesserella parasuis strain SC1401	55.682	94.879	0.528
dprA	Vibrio campbellii strain DS40M4	44.595	99.73	0.445
dprA	Vibrio cholerae strain A1552	42.162	99.73	0.42
dprA	Legionella pneumophila strain ERS1305867	41.223	100	0.418