Detailed information NTG1148861

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: C6H37_RS27800
• Genome accession: NZ_LT963408
• Coordinates: 5786426..5787490 (-)
• Length: 354 a.a.
• NCBI ID: WP_005739568.1
• Uniprot ID: A0A2S4IFK9
• Organism: Pseudomonas syringae group genomosp. 3 isolate CFBP6411
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5781426..5792490

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6H37_RS27775 (CFBP6411_05182)	aroK	5781986..5782504 (-)	519	WP_003378847.1	shikimate kinase AroK	-
C6H37_RS27780 (CFBP6411_05183)	pilQ	5782509..5784614 (-)	2106	WP_005739571.1	type IV pilus secretin PilQ	Machinery gene
C6H37_RS27785 (CFBP6411_05184)	pilP	5784662..5785189 (-)	528	WP_003378849.1	type 4a pilus biogenesis lipoprotein PilP	-
C6H37_RS27790 (CFBP6411_05185)	pilO	5785186..5785809 (-)	624	WP_003378850.1	type 4a pilus biogenesis protein PilO	-
C6H37_RS27795 (CFBP6411_05186)	-	5785806..5786426 (-)	621	WP_005739569.1	PilN domain-containing protein	-
C6H37_RS27800 (CFBP6411_05187)	pilM	5786426..5787490 (-)	1065	WP_005739568.1	pilus assembly protein PilM	Machinery gene
C6H37_RS27805 (CFBP6411_05188)	-	5787700..5790141 (+)	2442	WP_371411257.1	penicillin-binding protein 1A	-
C6H37_RS27810 (CFBP6411_05190)	-	5790454..5791722 (-)	1269	WP_003378855.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38075.57 Da
• Isoelectric Point: 4.7008

>NTDB_id=1148861 C6H37_RS27800 WP_005739568.1 5786426..5787490(-) (pilM) [Pseudomonas syringae group genomosp. 3 isolate CFBP6411]
MFELFGKKANTLLGIDISSTSVKLLELSRSGTRYKVESYAVEPLPANAVVEKNIAELEGVGQALSRVLAKAKTNVKIVAV
AVAGSAVITKTIEMDAGLSDDDMENQLKLEADQYIPYPLEEVAIDFEVQGYSVRNPERVEVLLAACRKENVEVREAALAL
AGLTARVVDVEAYALERSFGLLAAQLGNGHDELTVAVVDIGATMTTLSVLHHGRIIYTREQLFGGRQLTDEIQRRYGLSM
EEAGLAKKQGGLPDDYVSEVLDPFKDALVQQVSRSLQFFFAAGQYNSVDHIMLAGGTASISGLEHLIQRRIGTPTMVANP
FADMALSSKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1148861 C6H37_RS27800 WP_005739568.1 5786426..5787490(-) (pilM) [Pseudomonas syringae group genomosp. 3 isolate CFBP6411]
GTGTTCGAACTCTTTGGCAAGAAGGCCAATACCCTTCTAGGGATCGATATTAGCTCCACCTCGGTAAAACTCCTGGAATT
GAGTCGTTCCGGCACTCGTTACAAGGTCGAGTCTTACGCAGTAGAGCCGTTACCGGCCAACGCTGTCGTCGAAAAGAATA
TTGCCGAACTCGAAGGGGTTGGTCAGGCGTTGTCTCGCGTACTGGCCAAGGCCAAGACTAACGTCAAGATTGTGGCGGTT
GCCGTGGCGGGTTCCGCTGTGATCACCAAAACCATCGAGATGGACGCCGGTCTCTCCGACGACGACATGGAAAATCAGCT
TAAGCTTGAAGCTGATCAGTACATCCCTTATCCGCTCGAAGAAGTTGCCATCGATTTTGAAGTGCAGGGCTACTCGGTCC
GCAACCCGGAACGTGTCGAAGTCCTGTTGGCGGCCTGCCGCAAGGAAAACGTCGAGGTGCGCGAGGCTGCGCTGGCTCTC
GCCGGGCTGACGGCGCGTGTCGTGGACGTCGAGGCCTACGCGCTGGAACGTTCATTCGGGCTTCTGGCTGCGCAACTGGG
CAACGGTCATGACGAACTGACCGTTGCCGTGGTGGACATCGGCGCGACCATGACCACCCTCAGCGTGCTGCACCACGGCC
GAATCATCTATACCCGCGAGCAATTGTTCGGCGGCCGCCAGCTGACTGACGAAATTCAGCGCCGCTACGGGCTTTCCATG
GAAGAGGCCGGGCTGGCCAAGAAGCAGGGCGGGCTGCCTGACGATTATGTCAGCGAAGTGCTGGACCCCTTCAAGGACGC
GCTCGTGCAACAGGTTTCCCGATCCCTGCAGTTCTTCTTTGCGGCCGGTCAGTACAACTCCGTGGATCACATCATGCTGG
CAGGCGGTACGGCTTCGATTTCAGGGCTGGAGCATTTGATTCAGCGACGTATCGGCACGCCGACCATGGTTGCCAACCCG
TTTGCCGACATGGCCTTGAGCTCCAAGGTCAATGCCGGTGCGCTGGCCAGCGATGCGCCTGCCCTGATGATCGCGTGCGG
TCTGGCGTTGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A2S4IFK9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	56.215	100	0.562
comM	Acinetobacter nosocomialis M2	56.215	100	0.562
comM	Acinetobacter baylyi ADP1	53.672	100	0.537
pilM	Legionella pneumophila strain ERS1305867	46.761	100	0.469