Detailed information NTG1148081

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: CKW06_RS18995
• Genome accession: NZ_LT906480
• Coordinates: 4014108..4015166 (-)
• Length: 352 a.a.
• NCBI ID: WP_005410860.1
• Uniprot ID: A0A854DVP1
• Organism: Stenotrophomonas maltophilia strain NCTC10257
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4009108..4020166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKW06_RS18975 (SAMEA4076705_03808)	-	4010064..4012031 (-)	1968	WP_005410855.1	type IV pilus secretin PilQ	-
CKW06_RS18980 (SAMEA4076705_03809)	-	4012053..4012556 (-)	504	WP_050426971.1	pilus assembly protein PilP	-
CKW06_RS18985 (SAMEA4076705_03810)	pilO	4012583..4013239 (-)	657	WP_005410857.1	type 4a pilus biogenesis protein PilO	-
CKW06_RS18990 (SAMEA4076705_03811)	-	4013236..4014108 (-)	873	WP_024958263.1	PilN domain-containing protein	-
CKW06_RS18995 (SAMEA4076705_03812)	pilM	4014108..4015166 (-)	1059	WP_005410860.1	pilus assembly protein PilM	Machinery gene
CKW06_RS19000 (SAMEA4076705_03813)	-	4015386..4017809 (+)	2424	WP_024958264.1	penicillin-binding protein 1A	-
CKW06_RS19005 (SAMEA4076705_03814)	-	4018217..4018861 (+)	645	WP_024958265.1	hypothetical protein	-
CKW06_RS19010 (SAMEA4076705_03815)	-	4019121..4019864 (-)	744	WP_024958266.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37739.38 Da
• Isoelectric Point: 4.4047

>NTDB_id=1148081 CKW06_RS18995 WP_005410860.1 4014108..4015166(-) (pilM) [Stenotrophomonas maltophilia strain NCTC10257]
MGLIPKSQSPLVGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAMNRSGSKAKLAAAA
VAGSAVITKVIPMPAELDENDMEAQIELEAVNYIPYPIEEVNLDFEVIGAIPNNPEMVQVLLAASRSENVELRQSALELG
GLQAKVMDVEAFAVENAYALVASELPVSIDGVVALVDIGATMTTLNVLRGGRSLYSREQVFGGKQLTDEIMRRYGLSYEE
AGLAKRQGGLPESYEMEVLEPFKEATVQQISRLLQFFYAGSEFNRVDHIVLAGGCAVLGGLPEMVEEQLGVPTVVANPLA
QMTLGPKVNAHALAQDAPALMIATGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1148081 CKW06_RS18995 WP_005410860.1 4014108..4015166(-) (pilM) [Stenotrophomonas maltophilia strain NCTC10257]
GTGGGGCTCATCCCAAAAAGTCAGTCGCCGCTTGTAGGCGTCGACATCAGTTCGACTGCGGTAAAGCTTTTGCAGCTGTC
CCGCAGCGGCAATCGTTTCCGTGTGGAACATTACGCTGTGGAACCTCTTCCGCCGAATGCGGTGGTAGAGAAGAACATCG
TGGAAGTGGAGGCCGTGGGTGAGGCCATCCGCCGTGCCATGAACCGTTCAGGCAGCAAGGCCAAGCTGGCCGCTGCCGCC
GTCGCCGGGTCGGCGGTGATCACCAAGGTGATCCCGATGCCGGCCGAACTCGACGAGAACGACATGGAAGCCCAGATCGA
GCTGGAAGCGGTCAACTACATTCCGTACCCGATCGAGGAAGTGAACCTGGACTTCGAGGTGATCGGGGCGATCCCGAACA
ACCCGGAGATGGTCCAGGTGCTGCTGGCCGCGTCGCGTTCGGAGAACGTGGAACTGCGCCAGTCGGCCCTGGAACTGGGT
GGCCTGCAGGCCAAGGTGATGGACGTGGAGGCCTTCGCGGTCGAGAACGCCTACGCCCTGGTCGCCAGCGAGCTGCCGGT
GTCCATCGACGGCGTGGTCGCGCTGGTCGATATCGGCGCCACCATGACCACCCTCAACGTCCTGCGCGGCGGCCGCAGCC
TGTACAGCCGCGAACAGGTGTTCGGTGGCAAGCAGCTGACCGACGAGATCATGCGCCGTTACGGCCTGAGCTACGAGGAG
GCCGGCCTGGCCAAGCGCCAGGGCGGGCTGCCGGAAAGCTACGAGATGGAAGTGCTGGAGCCGTTCAAGGAAGCCACGGT
CCAGCAGATCAGCCGCCTGCTGCAGTTCTTCTATGCAGGCAGTGAGTTCAACCGCGTTGATCACATCGTGCTGGCCGGCG
GCTGCGCCGTGCTGGGCGGGCTGCCGGAAATGGTCGAGGAGCAGCTGGGCGTGCCGACCGTGGTCGCCAACCCGCTGGCA
CAGATGACCCTGGGCCCCAAGGTGAATGCGCATGCGCTGGCCCAGGATGCCCCCGCGCTGATGATCGCCACCGGTCTGGC
GCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

3D structure

• AlphaFold DB: A0A854DVP1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.136	100	0.511
comM	Acinetobacter nosocomialis M2	51.136	100	0.511
comM	Acinetobacter baylyi ADP1	50	100	0.5
pilM	Legionella pneumophila strain ERS1305867	47.863	99.716	0.477