Detailed information NTG1147471

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: CKV85_RS01795
• Genome accession: NZ_LT906454
• Coordinates: 367653..368579 (+)
• Length: 308 a.a.
• NCBI ID: WP_095121692.1
• Uniprot ID: -
• Organism: Streptococcus acidominimus strain NCTC11291
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 362653..373579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKV85_RS01780 (SAMEA4504048_00373)	-	362991..363854 (-)	864	WP_095121687.1	IS982 family transposase	-
CKV85_RS01785 (SAMEA4504048_00374)	amiA	364115..366088 (+)	1974	WP_095121688.1	peptide ABC transporter substrate-binding protein	Regulator
CKV85_RS01790 (SAMEA4504048_00375)	amiC	366154..367653 (+)	1500	WP_095121690.1	ABC transporter permease	Regulator
CKV85_RS01795 (SAMEA4504048_00376)	amiD	367653..368579 (+)	927	WP_095121692.1	oligopeptide ABC transporter permease OppC	Regulator
CKV85_RS01800 (SAMEA4504048_00377)	amiE	368588..369637 (+)	1050	WP_095121694.1	ABC transporter ATP-binding protein	Regulator
CKV85_RS01805 (SAMEA4504048_00378)	amiF	369652..370581 (+)	930	WP_095121696.1	ATP-binding cassette domain-containing protein	Regulator
CKV85_RS12205	-	370657..370782 (+)	126	WP_269457197.1	hypothetical protein	-
CKV85_RS01810 (SAMEA4504048_00379)	-	370889..372550 (+)	1662	WP_095121698.1	peptide ABC transporter substrate-binding protein	-
CKV85_RS01815 (SAMEA4504048_00380)	-	372665..373579 (+)	915	WP_017769008.1	ABC transporter permease	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34885.96 Da
• Isoelectric Point: 8.5848

>NTDB_id=1147471 CKV85_RS01795 WP_095121692.1 367653..368579(+) (amiD) [Streptococcus acidominimus strain NCTC11291]
MAQIDKNKFTFVELDTSAAEVIDSPAYSYWKSVFRQFFAKKSTLVMLIILVAIILMSFIYPMFANYDFKDVSNINDFSKR
FIWPNGEYWFGTDKNGQSLFDGVWYGARNSILISVIATLINTVIGVVVGGIWGVSKSFDRIMLEIYNVISNIPFLLIVIV
LSYSIGAGFWNLVFAFCVTGWLGIAYSIRVQVLRYRDLEYNLASRTLGTPMTKIVLRNLLPQLVSVIMTLVSQMLPMYIS
FEAFLSFFGLGLPISEPSLGRLIANYSTYLTDNAYLFWIPLTTLIMVSLPLYIVGQNLADASDPRSHR

Nucleotide

• Length: 927 bp

>NTDB_id=1147471 CKV85_RS01795 WP_095121692.1 367653..368579(+) (amiD) [Streptococcus acidominimus strain NCTC11291]
ATGGCTCAAATCGATAAAAATAAATTTACATTTGTAGAGTTAGATACCTCAGCAGCCGAAGTTATTGATTCGCCTGCCTA
CTCTTACTGGAAGTCAGTTTTTCGTCAGTTTTTTGCTAAAAAGTCAACACTTGTGATGTTAATCATCTTAGTAGCGATTA
TCTTGATGAGCTTTATTTATCCGATGTTTGCAAATTATGATTTTAAAGACGTAAGTAATATCAATGATTTCTCCAAACGC
TTCATTTGGCCAAACGGCGAGTATTGGTTTGGAACGGATAAAAACGGTCAATCTTTGTTTGATGGTGTGTGGTATGGCGC
TAGAAATTCTATCTTAATCTCTGTTATTGCAACTCTAATCAATACCGTTATTGGTGTTGTTGTCGGTGGTATTTGGGGTG
TCTCTAAGAGTTTTGACCGCATTATGCTAGAAATTTATAATGTCATCTCAAACATTCCATTTTTACTAATTGTTATTGTG
CTCTCATATTCCATTGGAGCAGGTTTTTGGAACCTTGTCTTTGCTTTTTGTGTGACAGGATGGCTCGGTATCGCTTATAG
CATTCGTGTTCAGGTTCTTCGCTATCGTGATTTAGAATATAATTTAGCGAGCCGAACCCTAGGGACGCCAATGACAAAAA
TAGTGTTAAGAAACCTTCTCCCTCAATTGGTATCTGTCATTATGACCTTAGTTAGTCAGATGTTACCGATGTATATTTCA
TTTGAAGCTTTCTTATCATTTTTCGGACTAGGATTACCAATTTCAGAACCTAGCTTAGGAAGACTTATCGCTAACTATTC
CACATATTTAACGGATAATGCTTATCTTTTCTGGATTCCATTAACCACCTTGATTATGGTTTCGCTACCGCTCTATATTG
TTGGACAAAATTTAGCGGATGCTAGTGATCCACGTTCGCATAGATAG

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	73.052	100	0.731
amiD	Streptococcus thermophilus LMG 18311	71.104	100	0.711
amiD	Streptococcus thermophilus LMD-9	71.104	100	0.711