Detailed information NTG1146637

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: PANN_RS30060
• Genome accession: NZ_LT883143
• Coordinates: 6309332..6310396 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C)
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6304332..6315396

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PANN_RS30035 (PANN_60200)	aroK	6304867..6305385 (-)	519	WP_003095833.1	shikimate kinase AroK	-
PANN_RS30040 (PANN_60210)	pilQ	6305397..6307541 (-)	2145	WP_023087871.1	type 4a pilus secretin PilQ	Machinery gene
PANN_RS30045 (PANN_60220)	pilP	6307595..6308119 (-)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
PANN_RS30050 (PANN_60230)	pilO	6308116..6308739 (-)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	-
PANN_RS30055 (PANN_60240)	pilN	6308736..6309332 (-)	597	WP_003095839.1	type 4a pilus biogenesis protein PilN	-
PANN_RS30060 (PANN_60250)	pilM	6309332..6310396 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
PANN_RS30065 (PANN_60260)	-	6310581..6313052 (+)	2472	WP_016562439.1	penicillin-binding protein 1A	-
PANN_RS30070 (PANN_60270)	-	6313157..6314425 (-)	1269	WP_023087872.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=1146637 PANN_RS30060 WP_003110888.1 6309332..6310396(-) (pilM) [Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C)]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1146637 PANN_RS30060 WP_003110888.1 6309332..6310396(-) (pilM) [Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C)]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGACTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466