Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DABAL43B_RS11980 Genome accession   NZ_LT799838
Coordinates   2811644..2812021 (-) Length   125 a.a.
NCBI ID   WP_011514416.1    Uniprot ID   A0A1U6GPZ7
Organism   Psychrobacter sp. DAB_AL43B     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2806644..2817021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DABAL43B_RS11960 (DABAL43B_2397) - 2807956..2808930 (-) 975 WP_079692595.1 CheR family methyltransferase -
  DABAL43B_RS11965 (DABAL43B_2398) - 2809110..2810120 (-) 1011 Protein_2360 methyl-accepting chemotaxis protein -
  DABAL43B_RS11970 (DABAL43B_2399) - 2810647..2811177 (-) 531 WP_079692597.1 chemotaxis protein CheW -
  DABAL43B_RS11975 (DABAL43B_2400) - 2811181..2811543 (-) 363 WP_079692598.1 response regulator -
  DABAL43B_RS11980 (DABAL43B_2401) pilG 2811644..2812021 (-) 378 WP_011514416.1 twitching motility response regulator PilG Regulator
  DABAL43B_RS11985 (DABAL43B_2402) - 2812843..2814069 (+) 1227 WP_227516687.1 efflux RND transporter periplasmic adaptor subunit -
  DABAL43B_RS11990 (DABAL43B_2403) - 2814403..2815125 (+) 723 WP_079692599.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14050.14 Da        Isoelectric Point: 4.7289

>NTDB_id=1146238 DABAL43B_RS11980 WP_011514416.1 2811644..2812021(-) (pilG) [Psychrobacter sp. DAB_AL43B]
MENNFDGLKVMVIDDSKTIRRTAETLLQKAGCEVVTAIDGFDALAKIVDHNPDIIFVDIMMPRLDGYQTCALIKNNPDYA
SKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFEAINQYR

Nucleotide


Download         Length: 378 bp        

>NTDB_id=1146238 DABAL43B_RS11980 WP_011514416.1 2811644..2812021(-) (pilG) [Psychrobacter sp. DAB_AL43B]
ATGGAAAATAATTTTGATGGTTTAAAAGTGATGGTTATTGATGACTCAAAAACTATTCGCCGTACCGCAGAGACGTTGTT
GCAAAAAGCTGGCTGTGAAGTTGTGACCGCGATTGATGGTTTTGATGCATTGGCTAAGATTGTTGATCATAATCCAGATA
TTATTTTTGTGGACATTATGATGCCACGTTTGGATGGATATCAAACCTGCGCTTTGATAAAAAACAATCCTGATTATGCC
AGTAAGCCAGTAATTATGTTGTCATCTAAAGATGGTTTGTTTGATAAAGCACGTGGACGTATTGTTGGTTCTGATGAGTA
TCTGACTAAGCCGTTTAGTAAGGATGAGCTTTTTGAGGCGATTAACCAGTATCGCTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1U6GPZ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.419

99.2

0.768
  vicR Streptococcus mutans UA159

40.517

92.8

0.376
  micA Streptococcus pneumoniae Cp1015

42.202

87.2

0.368
  pilH Synechocystis sp. PCC 6803

40.351

91.2

0.368

Multiple sequence alignment