Detailed information
Bioinformatically predicted
Overview
| Name | pilL | Type | Machinery gene |
| Locus tag | C7S04_RS03125 | Genome accession | NZ_LT592159 |
| Coordinates | 522882..523355 (+) | Length | 157 a.a. |
| NCBI ID | WP_012503482.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain WHO_U | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 517882..528355
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7S04_RS03095 (WHOU_00551) | dnaB | 518336..519742 (+) | 1407 | WP_010359914.1 | replicative DNA helicase | - |
| C7S04_RS03105 (WHOU_00552) | pilH | 520050..520712 (+) | 663 | WP_106176301.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| C7S04_RS03110 (WHOU_00553) | pilI | 520744..521361 (+) | 618 | WP_106176300.1 | type IV pilus modification protein PilV | Machinery gene |
| C7S04_RS03115 (WHOU_00554) | pilJ | 521358..522290 (+) | 933 | WP_106333332.1 | PilW family protein | Machinery gene |
| C7S04_RS03120 (WHOU_00555) | pilK | 522269..522880 (+) | 612 | WP_012503481.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| C7S04_RS03125 (WHOU_00556) | pilL | 522882..523355 (+) | 474 | WP_012503482.1 | PilX family type IV pilin | Machinery gene |
| C7S04_RS03130 (WHOU_00557C) | - | 523425..523733 (-) | 309 | WP_025456241.1 | AzlD family protein | - |
| C7S04_RS03135 | - | 523730..524441 (-) | 712 | Protein_526 | AzlC family ABC transporter permease | - |
| C7S04_RS03140 (WHOU_00560) | dut | 524607..525059 (+) | 453 | WP_003701071.1 | dUTP diphosphatase | - |
| C7S04_RS03145 (WHOU_00561) | dapC | 525131..526318 (+) | 1188 | WP_003701073.1 | succinyldiaminopimelate transaminase | - |
| C7S04_RS03150 (WHOU_00562) | yaaA | 526474..527253 (+) | 780 | WP_003687925.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 17486.30 Da Isoelectric Point: 9.9561
>NTDB_id=1144490 C7S04_RS03125 WP_012503482.1 522882..523355(+) (pilL) [Neisseria gonorrhoeae strain WHO_U]
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNVLKQFILKNPQDNNQIIKSKLETFVLGYKM
NPKIAKKYSVSVAFANTEKPRAYRLVGVPKAGTGYTLSVWMNSVGDGYKCRNATSAQTYSETLSANTGCEAFSNRKK
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNVLKQFILKNPQDNNQIIKSKLETFVLGYKM
NPKIAKKYSVSVAFANTEKPRAYRLVGVPKAGTGYTLSVWMNSVGDGYKCRNATSAQTYSETLSANTGCEAFSNRKK
Nucleotide
Download Length: 474 bp
>NTDB_id=1144490 C7S04_RS03125 WP_012503482.1 522882..523355(+) (pilL) [Neisseria gonorrhoeae strain WHO_U]
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTTGTCGCGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATGTTCTCAAAC
AGTTTATTTTGAAAAATCCCCAGGACAATAATCAGATCATCAAGAGCAAACTGGAAACATTTGTCTTAGGCTATAAGATG
AATCCGAAAATTGCCAAAAAATATAGTGTTTCGGTGGCATTTGCCAATACGGAAAAACCAAGGGCATACAGGTTGGTCGG
CGTTCCGAAGGCAGGGACGGGTTATACCTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTAATGCCA
CTTCTGCCCAGACCTATTCGGAGACCTTGTCCGCAAATACCGGCTGTGAAGCTTTCTCTAATCGTAAAAAATAG
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTTGTCGCGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATGTTCTCAAAC
AGTTTATTTTGAAAAATCCCCAGGACAATAATCAGATCATCAAGAGCAAACTGGAAACATTTGTCTTAGGCTATAAGATG
AATCCGAAAATTGCCAAAAAATATAGTGTTTCGGTGGCATTTGCCAATACGGAAAAACCAAGGGCATACAGGTTGGTCGG
CGTTCCGAAGGCAGGGACGGGTTATACCTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTAATGCCA
CTTCTGCCCAGACCTATTCGGAGACCTTGTCCGCAAATACCGGCTGTGAAGCTTTCTCTAATCGTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilL | Neisseria gonorrhoeae MS11 |
91.72 |
100 |
0.917 |
| pilX | Neisseria meningitidis 8013 |
85.35 |
100 |
0.854 |