Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | C7R98_RS10265 | Genome accession | NZ_LT591904 |
| Coordinates | 1735258..1735677 (+) | Length | 139 a.a. |
| NCBI ID | WP_115115831.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain WHO M | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1730258..1740677
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7R98_RS10215 (WHOM_01902C) | - | 1730524..1731975 (-) | 1452 | WP_033909284.1 | spermidine synthase | - |
| C7R98_RS10220 (WHOM_01903C) | - | 1731998..1732618 (-) | 621 | WP_003696151.1 | fused MFS/spermidine synthase | - |
| C7R98_RS10225 | - | 1732817..1733194 (-) | 378 | WP_010361697.1 | IS1595 family transposase | - |
| C7R98_RS10240 | - | 1733503..1733628 (-) | 126 | Protein_1755 | IS110 family transposase | - |
| C7R98_RS10255 (WHOM_01905) | - | 1734192..1734608 (+) | 417 | Protein_1756 | pilin | - |
| C7R98_RS10260 (WHOM_01906) | - | 1734739..1735119 (+) | 381 | Protein_1757 | pilin | - |
| C7R98_RS10265 (WHOM_01907) | pilE | 1735258..1735677 (+) | 420 | WP_115115831.1 | pilin | Machinery gene |
| C7R98_RS10270 (WHOM_01908) | - | 1735704..1736108 (+) | 405 | Protein_1759 | pilin | - |
| C7R98_RS10275 (WHOM_01909) | - | 1736489..1736893 (+) | 405 | Protein_1760 | pilin | - |
| C7R98_RS10280 (WHOM_01910) | - | 1737014..1737382 (+) | 369 | Protein_1761 | pilin | - |
| C7R98_RS10290 (WHOM_01911) | - | 1737917..1738315 (+) | 399 | Protein_1762 | pilin | - |
| C7R98_RS10295 (WHOM_01912) | lpxC | 1738817..1739740 (+) | 924 | WP_003687007.1 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | - |
| C7R98_RS10300 (WHOM_01913) | pilE | 1739846..1740250 (+) | 405 | WP_148699034.1 | pilin | Machinery gene |
| C7R98_RS14450 | - | 1740388..1740491 (+) | 104 | Protein_1765 | pilin | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 14929.82 Da Isoelectric Point: 10.0808
>NTDB_id=1144131 C7R98_RS10265 WP_115115831.1 1735258..1735677(+) (pilE) [Neisseria gonorrhoeae strain WHO M]
MPTRLDSRLRGNDEAILLAEGQKSAVTGYYLNHGTWPKDNTSAGVASSPTDIKGKYVQSVTVAKGVVTAKMKSDGVNKEI
KGKKLSLWAKREDGSVKWFCGQPVQRADAKADTVADAANANGINTKHLPSTCRDKHSDT
MPTRLDSRLRGNDEAILLAEGQKSAVTGYYLNHGTWPKDNTSAGVASSPTDIKGKYVQSVTVAKGVVTAKMKSDGVNKEI
KGKKLSLWAKREDGSVKWFCGQPVQRADAKADTVADAANANGINTKHLPSTCRDKHSDT
Nucleotide
Download Length: 420 bp
>NTDB_id=1144131 C7R98_RS10265 WP_115115831.1 1735258..1735677(+) (pilE) [Neisseria gonorrhoeae strain WHO M]
GTGCCGACAAGGCTGGATTCCCGCCTGCGCGGGAATGACGAAGCCATCCTTTTGGCCGAAGGTCAAAAATCAGCCGTTAC
CGGGTATTACCTGAATCACGGCACATGGCCGAAAGACAACACTTCTGCCGGCGTGGCATCCTCCCCCACCGACATCAAAG
GCAAATATGTTCAAAGCGTTACGGTCGCAAAAGGCGTCGTTACCGCCAAAATGAAATCAGACGGCGTAAACAAAGAAATC
AAAGGCAAAAAACTCTCCCTGTGGGCCAAGCGTGAAGACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTCAGCGCGC
CGACGCCAAAGCCGACACCGTTGCCGACGCCGCCAACGCCAACGGCATCAACACCAAGCACCTGCCGTCAACCTGCCGCG
ATAAACACTCTGACACCTAA
GTGCCGACAAGGCTGGATTCCCGCCTGCGCGGGAATGACGAAGCCATCCTTTTGGCCGAAGGTCAAAAATCAGCCGTTAC
CGGGTATTACCTGAATCACGGCACATGGCCGAAAGACAACACTTCTGCCGGCGTGGCATCCTCCCCCACCGACATCAAAG
GCAAATATGTTCAAAGCGTTACGGTCGCAAAAGGCGTCGTTACCGCCAAAATGAAATCAGACGGCGTAAACAAAGAAATC
AAAGGCAAAAAACTCTCCCTGTGGGCCAAGCGTGAAGACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTCAGCGCGC
CGACGCCAAAGCCGACACCGTTGCCGACGCCGCCAACGCCAACGGCATCAACACCAAGCACCTGCCGTCAACCTGCCGCG
ATAAACACTCTGACACCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae strain FA1090 |
73.571 |
100 |
0.741 |
| pilE | Neisseria gonorrhoeae MS11 |
71.942 |
100 |
0.719 |